Gene Vapar_2147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2147 
Symbol 
ID7973833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2292613 
End bp2292951 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content62% 
IMG OID644792734 
Productferredoxin, 2Fe-2S type, ISC system 
Protein accessionYP_002944048 
Protein GI239815138 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID[TIGR02007] ferredoxin, 2Fe-2S type, ISC system 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.442725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACCA TCAAGATATT TCCGCATCCC GAGTACTGCC CCGAGGGTGC AGAAATCACG 
GCGCCGGCCG GCACCTCGAT CTGCGAGGCG CTGCTCGACA ATCACATCAA CATCGAGCAC
GCCTGCGAGA TGAGCTGTGC CTGCACCACC TGCCACGTGG TCGTGCGCCA GGGCTTCAAT
TCGCTGAACG AGGCCGAGGA GGGCGAGGAA GACCTGCTCG ACCGCGCCTG GGGCCTGGAG
CCACAATCGC GCCTGAGCTG CCAGGCGATC CTGGCGCAGG AAGATGTGAC GATCGAGATT
CCCAAGTACT CGATCAACCA CGCCAAAGAA AACCACTGA
 
Protein sequence
MPTIKIFPHP EYCPEGAEIT APAGTSICEA LLDNHINIEH ACEMSCACTT CHVVVRQGFN 
SLNEAEEGEE DLLDRAWGLE PQSRLSCQAI LAQEDVTIEI PKYSINHAKE NH