| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2145 |
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| Symbol | |
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| ID | 7973831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2290225 |
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| End bp | 2290743 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792732 |
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| Product | co-chaperone Hsc20 |
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| Protein accession | YP_002944046 |
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| Protein GI | 239815136 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1076] DnaJ-domain-containing proteins 1 |
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| TIGRFAM ID | [TIGR00714] Fe-S protein assembly co-chaperone HscB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.186352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGA ACGACACCGA CTTTCAACTG TTCGACGTCC CCGCGACTTT CGCGCAGGAC
CGTGCCGTGC TCGATGCGCG GTGGAAGGAA CTGCAGCGCG AGGCCCATCC CGACCGCTTT
GCCGCGCAGG GCGCCGCGGC GCAGCGCGTG GCGATGCAAT GGTCGGTGCG CATCAACGAG
GCCTACCAGC GCCTCAAGGA TCCGATCCGC CGGGCCAGCT ACATCTGCGA GCTCCACGGT
GCGCCGCTGA ACGCCGAGAA CAACACGGCC ATGCCGCCCG ATTTCCTGAT GCAGCAGATG
GAATGGCGCG AGGCGCTCGA CGACGCCGGC GACACCGCCG CGGTCGAGCA GCTGCAGGCC
GAAGTCGAGG CCGGCCGCGC CCGCGCGCTG TCGTCGCTCG ACTGGCTGAT CGACGAGAAG
GGCGACTACC CGGCCGCCGC GCAGCAGGTG AGAGCCCTCA TGTTCATTGA GCGCTTCGGA
CAGGACGTCG AAGCCAAATT CGATCAGTTG GGACAATAG
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| Protein sequence | MNLNDTDFQL FDVPATFAQD RAVLDARWKE LQREAHPDRF AAQGAAAQRV AMQWSVRINE
AYQRLKDPIR RASYICELHG APLNAENNTA MPPDFLMQQM EWREALDDAG DTAAVEQLQA
EVEAGRARAL SSLDWLIDEK GDYPAAAQQV RALMFIERFG QDVEAKFDQL GQ
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