| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2143 |
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| Symbol | |
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| ID | 7973829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2289417 |
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| End bp | 2289836 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792730 |
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| Product | FeS cluster assembly scaffold IscU |
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| Protein accession | YP_002944044 |
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| Protein GI | 239815134 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
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| TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.26628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATATT CATCCAAGGT CATCGACCAC TACGAAAACC CCCGCAACGT CGGCTCCTTC
GAAAAGGGCG ACGACTCGGT CGGCACCGGC ATGGTCGGCG CGCCGGCCTG CGGCGACGTC
ATGAAGCTGC AGATCAAGGT CAACCCCGAG ACCGGCGTGA TCGAAGACGC GCGCTTCAAG
ACCTACGGCT GCGGCTCGGC CATTGCCTCG TCCTCGCTCG TGACCGAGTG GGTCAAGGGC
AAGACGCTCG ACGAAGCCGC GGCGCTCAAG AACGCGCAGA TCGCCGAGGA ACTGGCGCTG
CCGCCCGTCA AGATCCACTG CTCGATCCTG GCCGAAGACG CCATCAAGGC CGCCGTGAGC
GACTACAAGG CCAAGCACGG CGCCAAGACG GCAGAAGCCG AGCCATCGGC AGTCCACTGA
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| Protein sequence | MAYSSKVIDH YENPRNVGSF EKGDDSVGTG MVGAPACGDV MKLQIKVNPE TGVIEDARFK
TYGCGSAIAS SSLVTEWVKG KTLDEAAALK NAQIAEELAL PPVKIHCSIL AEDAIKAAVS
DYKAKHGAKT AEAEPSAVH
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