| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2139 |
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| Symbol | |
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| ID | 7973825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2283896 |
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| End bp | 2285092 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792726 |
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| Product | aromatic amino acid aminotransferase |
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| Protein accession | YP_002944040 |
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| Protein GI | 239815130 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.177387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATGT TCACCGCGGT CGAAATGGCA CCGCGCGACC CGATCCTCGG CCTCAACGAG
CAGTTTGCAG CCGACACCAA CCCCAACAAG GTCAACCTCG GCGTCGGCGT CTACTACGAC
GACAACGGCA AGCTGCCGCT TTTGCAGTGC GTGCAGGCCG CCGAACAGAA CATGATGAAG
GCGCCCACGG CGCGCGGCTA CCTGCCGATC GACGGCATCG TGGCGTATGA CAACGCGGTC
AAGGGCCTGG TCTTCGGCGC CGACAGCGAG CCGGTGCAAT CGGGCCGCGT GGCCACCATC
CAGGCCATCG GCGGCACCGG CGGCCTGAAG GTCGGCGCCG ACTTCCTCAA GAAGCTCAAC
CCCAAGGCCA AGGTGCTGAT CAGCGACCCG AGCTGGGAAA ACCACCGCGC CCTGTTCACC
AATGCGGGCT TCGAGGTCGA AAGCTACCCC TACTACGACG CCGCCAAGCG CGGCGTCAAC
TTCGACGGCA TGCTGGCCGC CCTGAACGCG GCGCCGGCCG GCACCGTCGT GGTGCTGCAC
GCCTGCTGCC ACAACCCGAC CGGCTACGAC ATCACGCCCG AGCAGTGGGA CCAGGTCGTG
GCCGCGGTCA AGGCCAAGGG CCTGGTGCCC TTCCTCGACA TGGCCTACCA GGGCTTCGGC
TACGGCCTGA AGGAAGACGG CGCGGCGGTC GCCAAGTTCG TCGACGCGGG CCTGACCTTC
TTCGTCTCGA CCTCGTTCTC GAAGAGCTTC AGCCTCTACG GCGAGCGCGT GGGTGCCCTG
TCGGTGCTGT GCGAGAACAA GGAAGAAGCC GGCCGCGTGC TGTCGCAGCT CAAGATCGCG
ATCCGCACCA ACTACAGCAA CCCGCCGATC CACGGCGGCG CCGTGGTGGC CGCAGTGCTC
GGCAACCCCG AGCTGCGCGC CCTGTGGGAA AAGGAACTCG GCGAAATGCG CGTGCGCATC
AAGGCCATGC GCCAGAAGCT GGTCGACGGC CTCAAGGCCG CTGGCGTGAA GGAAGACATG
AGCTTCATCA CCACGCAGAT CGGCATGTTC AGCTACTCGG GCCTCAGCAA GGACCAGATG
GTGCGCCTGC GCAACGAGTT CGGCGTGTAC GGCACCGACA CCGGCCGCAT GTGCGTGGCC
GCGCTCAACA GCAAGAACAT CGACTACGTC TGCGCGTCGA TCGCCAAGGT CATCTAG
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| Protein sequence | MSMFTAVEMA PRDPILGLNE QFAADTNPNK VNLGVGVYYD DNGKLPLLQC VQAAEQNMMK
APTARGYLPI DGIVAYDNAV KGLVFGADSE PVQSGRVATI QAIGGTGGLK VGADFLKKLN
PKAKVLISDP SWENHRALFT NAGFEVESYP YYDAAKRGVN FDGMLAALNA APAGTVVVLH
ACCHNPTGYD ITPEQWDQVV AAVKAKGLVP FLDMAYQGFG YGLKEDGAAV AKFVDAGLTF
FVSTSFSKSF SLYGERVGAL SVLCENKEEA GRVLSQLKIA IRTNYSNPPI HGGAVVAAVL
GNPELRALWE KELGEMRVRI KAMRQKLVDG LKAAGVKEDM SFITTQIGMF SYSGLSKDQM
VRLRNEFGVY GTDTGRMCVA ALNSKNIDYV CASIAKVI
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