| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2126 |
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| Symbol | |
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| ID | 7973812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2269864 |
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| End bp | 2270511 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792713 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002944027 |
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| Protein GI | 239815117 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.199216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCC TCACCCTCAC CCCGCGCGCC CTCTATGAAG AGGTGGCCGA ACTGCTGCGC
CAGCGGATCT TCCGCCGCGA GCTCGAGCCG GGCAGCTGGA TCGACGAACT CAAGCTGGCC
GAGGAATACG GCATCAGCCG CACGCCGCTG CGCGAAGCCC TGAAGGTGCT GGCCGCCGAA
GGCCTGGTGA CCATGAAGGT GCGGCGCGGC GCCTACGTCA CCGAGGTGTC CGAGCAGGAC
CTGGCGGACG TCTACCACCT GCTCTCGCTG CTGGAAAGCG ATGCGGCCGG CGTGGTGGCC
GAGCGCGCGA GCGAGGCCCA GCGCGCGGAG CTGAAGGCGC TGCACGCCGA ACTCGAAGCG
GCAGGCGCCC CCGGCAAGGA AGACCGCGAG CATTTCTTCG CGGTCAACGA GCGCTTCCAC
ATGTGCCTTT TGGCCATTGC GAACAACAAA TGGCGCGACC AGATGGTGGC CGACCTGCGC
AAGGTGATGA AGCTCAATCG CCACAACTCG CTGCTGAAGG CGGGGCGCAT CGCCGAATCG
CTCGCGGAGC ACCGGTCGGT AATGGCGGCG ATCGAGGCGC GGGATGCCGC GGCGGCGATG
GCGCGGATGC GCGAACACTT CACCAACGGC CTGGAAGCCG CGAATTAG
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| Protein sequence | MSALTLTPRA LYEEVAELLR QRIFRRELEP GSWIDELKLA EEYGISRTPL REALKVLAAE
GLVTMKVRRG AYVTEVSEQD LADVYHLLSL LESDAAGVVA ERASEAQRAE LKALHAELEA
AGAPGKEDRE HFFAVNERFH MCLLAIANNK WRDQMVADLR KVMKLNRHNS LLKAGRIAES
LAEHRSVMAA IEARDAAAAM ARMREHFTNG LEAAN
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