| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2104 |
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| Symbol | |
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| ID | 7972506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2246354 |
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| End bp | 2247550 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792693 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002944007 |
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| Protein GI | 239815097 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACA GCAAGAACCT CGCTCTCTAC GTTCTCGGCG TCGTCGCCGT GCTCGCCCTG
CCCATCTTCC TGCAGAGCCA GGGCAACGCC TGGGTGCGCA TCGCCGACAT CGCATTGCTC
TACGTGATGC TCTCGCTCGG CCTGAACATC GTGGTCGGCT ACGCCGGCCT GCTCGACCTG
GGCTATGTCG CCTTCTTTGC CGTGGGGGCC TACCTCTTCG CGCTGATGGG CTCGTCGCAC
CTGTCCGAAA CCTTCCCGTG GTTCAAGGCC ATGTTCCCGA ACGGGCTGCA CACCTCGCTG
CTCATCGTGG TGCCGCTGGC GCTGGTGGTG GCGGGCGTGC TGGGCGTGAT GCTCGGGGCG
CCCACGCTCA AGCTGCGGGG CGACTACCTG GCCATCGTGA CGCTCGGCTT CGGCGAAATC
ATCCGGGTGT TCCTGAACAA CCTCGACCAG CCGATCAACA TCACCAATGG GCCGAAGGGC
ATCACCGCCA TCGACTCCAT CAAGTTCTGG GGGCTCGACC TCGGCAAGGC ATGGAAGTTC
GACGGCTTCT CGATCTCGTC GGTCACGCTC TACTACTACC TGTTCCTTGC GCTGGTGGTT
GCCACCATCA TCATCTCGCA CCGCCTGCAG ATGTCGCGCA TCGGCCGCGC CTGGATGGCC
ATCCGCGAGG ATGAGATCGC CGCCAAGGCC ATGGGCATCA ACACCCGCAA CATGAAGCTC
CTGGCCTTCG GCATGGGCGC CAGCTTCGGC GGCGTGTCTG GCGCCATGTT CGCGGCCTTC
CAGGGCTTCG TCTCGCCCGA GTCGTTCAGC CTCATGGAGT CGGTGATGAT CGTCGCCATG
GTCGTGCTGG GCGGCATCGG CCACCTGCCG GGTGTGATCC TGGGCGCCGT GCTGCTGGCC
GCCTTGCCCG AGGTGCTGCG CTACGTCGCC GGGCCGCTGC AAGCCATGAC CGACGGCCGC
CTCGACGCGT CCATCCTGCG CCAGCTGTTC ATTGCGCTGG CCATGATCAT CATCATGCTG
GTGCGCCCGC GCGGCCTCTG GCCTTCGCCC GAACATGGCA AGACCTTGCA GCGCAAGGGC
GCCGCAGCCG GCGCGCCGGT TGCGCCCGGT TCGCTCCAGA CCCATGCGCC AGGCATCGAG
ACGCCAGCCG ACGAACTGCC GGGTGCAGCG TCGCGTCCCA TGTCGATCAA TCCGTGA
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| Protein sequence | MKNSKNLALY VLGVVAVLAL PIFLQSQGNA WVRIADIALL YVMLSLGLNI VVGYAGLLDL
GYVAFFAVGA YLFALMGSSH LSETFPWFKA MFPNGLHTSL LIVVPLALVV AGVLGVMLGA
PTLKLRGDYL AIVTLGFGEI IRVFLNNLDQ PINITNGPKG ITAIDSIKFW GLDLGKAWKF
DGFSISSVTL YYYLFLALVV ATIIISHRLQ MSRIGRAWMA IREDEIAAKA MGINTRNMKL
LAFGMGASFG GVSGAMFAAF QGFVSPESFS LMESVMIVAM VVLGGIGHLP GVILGAVLLA
ALPEVLRYVA GPLQAMTDGR LDASILRQLF IALAMIIIML VRPRGLWPSP EHGKTLQRKG
AAAGAPVAPG SLQTHAPGIE TPADELPGAA SRPMSINP
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