| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2097 |
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| Symbol | |
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| ID | 7972499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2240161 |
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| End bp | 2241069 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792686 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002944000 |
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| Protein GI | 239815090 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCTTC GTCACCTGCG CTACTTCACG GTCCTGGCCG AAGAGCTGCA TTTCGGCCGG
GCGGCGCGGC GGCTCTCGAT TTCGCAGCCG CCCCTGAGCG TGGCCATTCG CCAACTGGAG
GATTCGGTCG GCGCGCAGCT TTTCGAGCGC AACAGCAAGG CAGTGCGCCT CACCGCCGCG
GGCAGGGCGC TGCAGGCCTC GGCGCGCGCG CTGCTGCGCG ACGCGGACGA GGCGCTGCTG
GAAGCGCGGC ACGTGGCCGA AGGCTCCGCG GGGCGGCTGC GCATCGGGTT CGTCGGTGCC
ATGCTCTACC GCGGCCTGCC GCAGGCACTG ACGCGCTTTC AGGCGGCGCA TCCGGCGGTG
CGGGTCACGC TCACCGAACT CAATTCCGAT CAGCAGATGG CTGAGCTTCT GCACGACCGG
CTGGACATCG GCTTTGTGCA CACGGGCCGG GTGCCGGCCG AACTGCAATG CCGGCTGCTG
GTTTCCGAAC CGTTCGTCGC ATGCCTTCCG GCCGAGCATT CGCTGGCGAA GAAGCGCAAA
GTGGCGCTCG CCACCCTGCG CGACGAATCC TTCGTGCTGT TTTCGCGCGG CGCCTCGCCC
GATTACCACG AACGTATCCT GTCCATTTGC GCCGACGCCG GCTTCAGGCC CGAGGTGCGC
CAAGAGGTAC GCCATTGGCT CGCGGTCGTG TCGCTCGTGT CGCAAGGCAT GGGCGTGGCG
CTCGTGCCCG ACGCGATGCG CCATTGCGCG CTGCCGGGGG CGGTGTTCCG TCCTTTGGAG
GGCGCGAGCA CGCCGTCCGA GGCGTATGGC GTGTGGCTGG CGACATCGCA GAACGTCTTG
GTGCCTCGGC TGCTCGATGA AATAGCTCGC AGCCTTGGGC AGCGTCGTCA ATCACAGGGG
GCGGGCTGA
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| Protein sequence | MELRHLRYFT VLAEELHFGR AARRLSISQP PLSVAIRQLE DSVGAQLFER NSKAVRLTAA
GRALQASARA LLRDADEALL EARHVAEGSA GRLRIGFVGA MLYRGLPQAL TRFQAAHPAV
RVTLTELNSD QQMAELLHDR LDIGFVHTGR VPAELQCRLL VSEPFVACLP AEHSLAKKRK
VALATLRDES FVLFSRGASP DYHERILSIC ADAGFRPEVR QEVRHWLAVV SLVSQGMGVA
LVPDAMRHCA LPGAVFRPLE GASTPSEAYG VWLATSQNVL VPRLLDEIAR SLGQRRQSQG
AG
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