| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2096 |
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| Symbol | |
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| ID | 7972498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2238345 |
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| End bp | 2240054 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792685 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002943999 |
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| Protein GI | 239815089 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAGCC ACGCTGCAAT CGACGGCGGC ACCGCCGTCC ATCCCGTGCC CGATCGCCAC
GGCCGAAGCC TCTATGCCGA GGACGCAGAG CTGCACAGGT TGCTGGCGGT GTACCTGCCG
GCCGACCTGC TGGCGCACAT GCGCCCGCAC TTCGAACGGC TCGGGACCCT TGCCGGTGGC
CGGCTCGACG AGCTCGCGCA CACCGCCGAC CGCAATCCCC CGACACTGAC TCTGCGCACC
CGCACCGGCA TCGACGACCC GCAGGTCCAC AAGCATCCCG CGTACGTCGA GATGGAACGG
CTCGCGCTGA GCGAGTTCGG CCTTGCCGCG ATGTCGCACC GCGAAGACAC ACTCGGCTGG
AAGGGCCGCA TGCCGCCGTT GGTCAAGTAC GTGCTGACCT ATCTCTTCGT GCAGGCGGAA
TTCGGCCTGT GCTGCCCGGT TTCCATGACG GATTCGCTCG CGCGGACCCT GAAGAAATTC
GGCAGCCCGG AGTTGGTCGA GCGCTTCCTG CCGCGCTTCC AGTCGCTCGA TTTCGACATG
CTGGCGCAGG GCGCGATGTT CATGACCGAG CAGGCGGCCG GCTCCGACAT CGCGGCCACC
GAGACCCGCG CCTGGCAGGA CGAACAGGGC CAGTGGCGCC TGGCCGGCGA CAAGTGGTTC
TGCTCCAACC CCGATGCGGA TTTCGCGATG GTGCTGGCGC GCGTCGACGG CGGCCCGCCA
GGCATGAAAG GCGTGTCGCT GTTCCTGCTG CCGCGCCGCC TCGACGACGG CAGCGCCAAC
CGCTATCGCA TCCTGCGGCT GAAGGACAAG CTGGGCACGC GCTCGATGGC CAGCGGCGAG
ATCAGGCTAG AAGGCGCCCT GGCCTACCTG GTCGGCGAGC AGGGCCGCGG CTTCGTGCAG
ATGGCGGATA TGGTGAACAA CTCGCGCCTG TCGAACGGCG TGCGCGCCGC CGGCCTGATG
CGCCGCGCCG TGGCGGAGGC CGAGTACATC GCGCACGAGC GCCGCGCCTT CGGCAGGCGG
CTGGAAGACA TGCCGCTGAT GCAGCGCCAG CTCGACAAGT TGCGTCTGCC GGCCGAGCAG
GCGCGCAGCA TGTTGTTCCA GACCGCGCAG GCGCTGGCGC GCTCCGACAG CGGCGAGAGC
ACCGCCTATC CGCTGCTGCG CATCCTCACG CCGCTCATCA AGTTTCGCGC CTGCCGCGAT
GCGCGCAAAG TCACCGGCGA CGCGATGGAG GTGCGCGGCG GCTGCGGCTA CATCGAAGAA
TGGAGCGACC CGCGGCTGCT GCGCGACGCC CATCTCGGCT CGATCTGGGA AGGCACCAGC
AACATCGTCG CGCTCGATGT GATCCGCGCA GTCAAGCGCG AAGGTTCGCT GCCGGTGCTG
CAAGCGCACT TCGAGGGCCT CCTCGACGAC GCGCCGCTCG CGCCGGCCTT TGCCGCCGCC
CTGCGCGATG CGCTCGGACG TGCTGCCGCG CTCGCATTGC TCGCGGCCGA AGATGGCGGG
GATCGGCTCG CGCGCCAGGC GGCTTCCGCG CTCTACCACG TGGTCAGCGC CATCGCGATG
GCATGGGAGG GTGCGCGCGG CGGCTCGGCG CAGCGCATCG GATGGGCGCA GCTGGTGCTG
CTGCATCGCG TGATGCCTCG CGACCCGCTC GCCGCGTCGG AAGTGCCGCG CGACTGGACC
GCCGGCACCC CCGTTGCCCT CTCAGCCTGA
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| Protein sequence | MPSHAAIDGG TAVHPVPDRH GRSLYAEDAE LHRLLAVYLP ADLLAHMRPH FERLGTLAGG
RLDELAHTAD RNPPTLTLRT RTGIDDPQVH KHPAYVEMER LALSEFGLAA MSHREDTLGW
KGRMPPLVKY VLTYLFVQAE FGLCCPVSMT DSLARTLKKF GSPELVERFL PRFQSLDFDM
LAQGAMFMTE QAAGSDIAAT ETRAWQDEQG QWRLAGDKWF CSNPDADFAM VLARVDGGPP
GMKGVSLFLL PRRLDDGSAN RYRILRLKDK LGTRSMASGE IRLEGALAYL VGEQGRGFVQ
MADMVNNSRL SNGVRAAGLM RRAVAEAEYI AHERRAFGRR LEDMPLMQRQ LDKLRLPAEQ
ARSMLFQTAQ ALARSDSGES TAYPLLRILT PLIKFRACRD ARKVTGDAME VRGGCGYIEE
WSDPRLLRDA HLGSIWEGTS NIVALDVIRA VKREGSLPVL QAHFEGLLDD APLAPAFAAA
LRDALGRAAA LALLAAEDGG DRLARQAASA LYHVVSAIAM AWEGARGGSA QRIGWAQLVL
LHRVMPRDPL AASEVPRDWT AGTPVALSA
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