| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2094 |
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| Symbol | |
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| ID | 7972496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2236198 |
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| End bp | 2237328 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792683 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_002943997 |
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| Protein GI | 239815087 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAT CACCTTCCCG GGCTGGCGCA CTGGCCGGTA TTCGCGTGCT CGACATCTCC
CGCATCCTCG GTGGCCCCTA CTGCGGCCAG ATCCTGGGCG ATCACGGGGC CGACGTGCTC
AAGGTCGAGC CGCCACAAGG CGACGACACA CGCACCTGGG GTCCGCCGTT CAAGGACGGC
GTGGCTTCTT ACTATCACGG GCTCAACCGC AACAAGCGGA CGATGCACCT CGACCTGGGC
AAAGCGGAGG GGCGCGAGGC GCTGCTCGCG CTGGTCGCCG AAGCCGATGT GCTGATCGAG
AATTTCAAGA CCGGCACGAT GGAGCGCTGG GGCATCGGCT ACGAGACCCT GTCACAGCGC
TTCCCGCGGC TCGTATGGTG CCGCGTGTCC GGCTTCGGAT CTGACGGCCC GCTCGGCGCC
CTGCCCGGCT ACGACGCCGC GGTGCAGGCG ATGACGGGCA TCATGAGCAT CAACGGCGAA
GCCGACGGCG GGCCGCTGCG CGTCGGCCTG CCGGTGGTCG ACATGGTCAC AGGCCTCAAT
GCGGTGATCG GCGTGCTGCT GGCGCTGCAG GAGCGCAATC GCAGCGGATG CGGCCAGTTC
GTCGAGGCGG CGCTGTACGA CAGTGGCCTG TCGCTGCTGC ACCCGCACGC GGCGAACTGG
TTCGTCGACG GCAAGGCGCC CAAGCGCACC GGCAATGCCC ACCCCAACAT CTATCCCTAC
GACGCGCTGG CGACCGGCAC CGAGCCCGTT TTCGTGGCGG TCGGCAACAA CGGGCAGTTC
GCGACCTTCT GCCGCTGCAT AGGCGTACCG ACGTTGGCGG ACGATCCGCT CTACGCCACG
GCCGGTGCGC GTTCGGTGAA CCGCGAAGCG CTGAAGGCCC GCCTCGAAGA GGCCATGAAA
GTGTTCGACG GCAACGCGCT GGTCGAGGCA TTGATGGCCG CCGGCGTGCC CGCCGCGCCG
GTGCTGCCGG TCGATGCGGC GCTCGCGCAT CCGCACACAG CGCATCGCGG CATGGTGGTG
GAGATGCCGG GCGGCTACCG CGGCATCGGC GCGCCCGTCA AACTTGGCCG CACGCCGGCC
ACCTATCGCC ATGCGCCGCT CACGCCAGGC GAGTGCTTCG AAGCGCGTTG A
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| Protein sequence | MTASPSRAGA LAGIRVLDIS RILGGPYCGQ ILGDHGADVL KVEPPQGDDT RTWGPPFKDG
VASYYHGLNR NKRTMHLDLG KAEGREALLA LVAEADVLIE NFKTGTMERW GIGYETLSQR
FPRLVWCRVS GFGSDGPLGA LPGYDAAVQA MTGIMSINGE ADGGPLRVGL PVVDMVTGLN
AVIGVLLALQ ERNRSGCGQF VEAALYDSGL SLLHPHAANW FVDGKAPKRT GNAHPNIYPY
DALATGTEPV FVAVGNNGQF ATFCRCIGVP TLADDPLYAT AGARSVNREA LKARLEEAMK
VFDGNALVEA LMAAGVPAAP VLPVDAALAH PHTAHRGMVV EMPGGYRGIG APVKLGRTPA
TYRHAPLTPG ECFEAR
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