| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2092 |
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| Symbol | |
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| ID | 7972494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2234946 |
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| End bp | 2235842 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644792682 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002943996 |
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| Protein GI | 239815086 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAACTTA ACCAGTTGCG CTCCTTCTTG GCTGTTGCTC GCACCGGCCA GTTGGTCCGT
GCTTCCGAGC AACTGCATCT GACTCAATCG GCCTTGTCCA AGCAGATCAA GAGCTTCGAG
GACGAATTGG GCGTTCTGCT TTTCGCTCGC ACCCCCGCCG GCATGGTCCT CAGCAGTGCT
GGTCGCCGGC TGCTGCCGGT CGTGGTGCAA ACCGTCGACT CGGCCCAGGA GATTGTCGCG
ATTGCCGCAT CGATACGGGG CGCGGTGTCG GGCGCGTTGC GGCTGGGTAC GATCATCGAC
CCTGAATCAA TCCGACTCGG TCCGCTGCTG GCAGCGCTGC TGGAGTTTTC GCCGCACGTG
GAGGTGTCGC TGTTCCATGG CATTTCGGGC GGTGTGCTTC AGTTGCTCAA GGAAAAGCAG
GTCGACGCAT GCTTCTATCT GGGCACGCTG AAGGACACGG AGGTCGCGGT CAGGCAACTC
GCGCTGGAGC ACTACGTGGT GGTGGGTCCC GCGGCATGGA AGGCGCGTTT AGAGAATGCC
AGTTGGGCCG AGCTCGCCGC CCTCCCCTGG ATGGCCACGC CACGAGGCAG TTCGCAGCAC
GGACTGGTCG ACCAGATGTT CGCCGAACGG GGCTTCGTCT ACCGTACCGT GGTCGAAGTC
GACCAAGAGG CCTCAATGAT CGAGCTTATC CAAACCGGTG TAGCGATCGG CCTGATGCGC
GAGCGCATTG CGGCCCCTGT GCTGCAGTCA GGTCAGGCCG TGGTGTGGCA CGGTGCACGT
CTTCCTTGCC CTCTGTCTCT GCTCTACCTG CGCGCGAACG AAGACACCAC CATGCTGGAA
GCCTTGCTTG CCGCCGTCCA AGCGGTGTGG CCGGCGGATG CTGAAGCAGC GCTCTGA
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| Protein sequence | MELNQLRSFL AVARTGQLVR ASEQLHLTQS ALSKQIKSFE DELGVLLFAR TPAGMVLSSA
GRRLLPVVVQ TVDSAQEIVA IAASIRGAVS GALRLGTIID PESIRLGPLL AALLEFSPHV
EVSLFHGISG GVLQLLKEKQ VDACFYLGTL KDTEVAVRQL ALEHYVVVGP AAWKARLENA
SWAELAALPW MATPRGSSQH GLVDQMFAER GFVYRTVVEV DQEASMIELI QTGVAIGLMR
ERIAAPVLQS GQAVVWHGAR LPCPLSLLYL RANEDTTMLE ALLAAVQAVW PADAEAAL
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