| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2087 |
|---|
| Symbol | |
|---|
| ID | 7972489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 2230647 |
|---|
| End bp | 2231405 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644792677 |
|---|
| Product | Cobyrinic acid ac-diamide synthase |
|---|
| Protein accession | YP_002943991 |
|---|
| Protein GI | 239815081 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1192] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTCA CGCGCGCGCG AGCCGAAGCT GCTCAAACAA CAGGCAGTGC TTCGATCGAA
GCAGCCCAAG CGGGCCAGAC AGCCGAGAAC CACTCGCGGG AAAGTGAGCC GCGGCCCGGG
AAGGTGATCG CGCTGCTGAA CCAGAAGGGC GGCGCGGGCA AGACAACGCT CGCCACGCAT
CTGGCCGGCG AGCTGGCGAT GCAAGGCCAG CGCGTCACGC TGCTCGATGC CGATCCGCAG
GGCTCGGCCT TGGACTGGGC GCAGCGGCGT CTCCAGAACG GCCAGAAGCG GCTCTACGGC
GTCTTTGGGC TCGCGAGGGA CTCGCTGCAC CAGGAGGCGC CGCAAATCGC CTTGGAGGCC
GACCACGTGG TCATCGATGG CCCACCCCGG GTCGCGGCCC TCGCGCGCTC CGCGCTGCTG
GCGGCCGACC TGGTGCTGAT CCCGGTGCAG CCCAGCGCCT ACGACGTATG GGCCAGCCAC
GAGATGGTGC AGCTCGTGAT CGAAGCGAGG GTGTTTCGGC CGCAACTGCG CGCGGCCTTT
GTGATCAACC GGCGCGTGGT GGGGACGGTC ATTGGGCGCG AGGCGCGCGC GGCGTTGGCC
GATCAGCCGT TCGCCGCCCT GTGCGCCGAA ATCTCTCAGC GCATCGTGTT CGCCGACAGC
GTTGCCGCGG GGCGGCTCGC CTGCGAAGCG GCGCCGACGT GCGCCGCGGC GCGCGAGATC
GCTGCGCTGG CGCAGGCCGT GCGGGAGATG CTGCGATGA
|
|---|
| Protein sequence | MEVTRARAEA AQTTGSASIE AAQAGQTAEN HSRESEPRPG KVIALLNQKG GAGKTTLATH
LAGELAMQGQ RVTLLDADPQ GSALDWAQRR LQNGQKRLYG VFGLARDSLH QEAPQIALEA
DHVVIDGPPR VAALARSALL AADLVLIPVQ PSAYDVWASH EMVQLVIEAR VFRPQLRAAF
VINRRVVGTV IGREARAALA DQPFAALCAE ISQRIVFADS VAAGRLACEA APTCAAAREI
AALAQAVREM LR
|
|---|
| |