| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2075 |
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| Symbol | |
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| ID | 7972477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2221195 |
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| End bp | 2221596 |
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| Gene Length | 402 bp |
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| Protein Length | 133 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644792668 |
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| Product | aspartate alpha-decarboxylase |
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| Protein accession | YP_002943982 |
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| Protein GI | 239815072 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0853] Aspartate 1-decarboxylase |
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| TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.19467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCCGCA CCCTGCTCAA GTCCAAGATC CATCGCGTGG CCGTCACCGA CTGCGAACTG
CACTACGAAG GCTCCTGCGC CATCGACGAA GACCTGCTGG ATGCCGCCAA CCTGGCCGAG
AACGAGCAGG TCCACATCTG GAACATCAAC AACGGCGAGC GCTTCGTCAC CTATGCGATC
CGCGGCGAGC GGGGCACCGG CATCATCTCG GTCAACGGCT CGGCCGCGCG CCGGGCCTCT
GTGGGCGACT TGATCATCAT CGCGGCCTTC GGCCTGGTGC CCGAAGACCA AGTGGCGGGC
TACAAGCCCA AGCTGGTGTT CGTGGACAGC GCCAACCGCA TCAAGGAAGA ACGCGCCCAC
ATTCCCGTGC AGGCCACTGC TAACAAGCCT GTAACGGTTT AA
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| Protein sequence | MFRTLLKSKI HRVAVTDCEL HYEGSCAIDE DLLDAANLAE NEQVHIWNIN NGERFVTYAI
RGERGTGIIS VNGSAARRAS VGDLIIIAAF GLVPEDQVAG YKPKLVFVDS ANRIKEERAH
IPVQATANKP VTV
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