| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2069 |
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| Symbol | |
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| ID | 7972471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2214098 |
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| End bp | 2215654 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792662 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002943976 |
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| Protein GI | 239815066 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTGC CAATCCATCT GACGCGCCGC CGTGCGCTCC AACTTTGTGC GGTCGGCCCG
GCCGTTGCCG CATCGGCGGG CCTGCTGGCG CAGCCGGCGC TCTCGCCGCT GCAGATCGTC
GGCCCCTGGG AATTAGGGGG CCTCGCCCCG GCCAACAGTG GCTACATCTT CACGCGCATG
CAGATTGCTG AAACGCTGAT GGAGGCGCGC GAGGACGGCA CCCCGTTGCC TGGCTTGGCT
GAACGCTGGG GAGTGTCGGC CGATGGGTTG GCATGGCGTT TCACGCTGCG TGCGACAGCG
CGCTTTCACG ACGGCACGCC AGTGACAGCC GCCGCAGTCG TGCGCTGCCT GCAGGCCGCA
CGCGTGGCCC CGGCGCTGCT CAGTCTGGCG CCGATCAAGT CGCTGGACGC CGAGGGTGCA
GGTGTCGTCT TGATCAGGCT GGCGTCGCCC TACGGCGGAT TGCCAGCGCT GCTGGCGCAC
AGCAGCACGA TGGTGCTCGC CCCGGCGAGC TACGGTCCCG ACGGCAGGGT GCGGACCATC
GTTGGCAGCG GCCCCTACCG CGTGGTGTCG CTCGCACCGC CCCAGCATGT GGAGGCGGCT
GCGTTCGACG GCTACGACGG CGCCAGGCCT GCCGTCGAGC GCGTGCGTTA CCTGGCGGCC
GGCCGCGCCG AAACCCGTGC GCTGATGGCC GAGGGCGGAC AGGCCGATCT GGCCTACGGG
CTCGACCCGG CAAGCCTCGT GCGACTGCGC AAGCGCGGCC AGGTTCGCGT CGATACGGTG
ACGTTGCCAC GCACCGTGAT CCTCAAAGTC AATGCAGGTC TGCCGGCCTT GAAAGACCTG
CGCGTGCGGC AGGCGCTCAG CCTGTGCATC GATCGGGCCG GCATTGCGAA GGCCTTGCTG
CGTGACCCCG AGCTGGCGGC AACGCAACTC TTTCCTCCGA CGCTCAAGGC CTGGCACGAC
CCCGCGCTGG CGCCATTGAC CCACGACCCC GCCGCTGCGG CGAGGCTTCT GGCCGAGGCC
GGCTGGCGAC GGGCGGCCGA CGGCTTGCGC GACGCTTCGG GCCAGCCATT ACGCCTGTCG
CTGCGGACCT TTCCCGATCG GCCGGAGTTG CCCGTCATCG CCTCCGCGCT GCAGGAGCAG
TGGCGACAGG CTGGCATCGC GGTGCAGGTC GGCGTCGGCA ATTCGGGCGA CATTCCGCTG
GGCCACCGCG ACGGCAGCCT GCAACTGGGC CTGGCCGCGC GCAACTACGC CACGGTGCCC
GACCCCACGG GCACGCTGAT GCAGGATTTC GGGGCCTCGG GGGGCGACTG GGGCGCGATG
GGCTGGACCA GCGATGCGCT GGTCAAGGCA CTTTCCGAGC TTTCGCTCGG CCCATCGTCG
GCCGAGCGCA CGGCCAGGTT GCGCGCGCAG GTCGCGGCAG TGCTTCAGGC CGAATTGCCG
GTGATCCCGA TCGCCTGGTA CCGCCAACAG GTGGCGGTCA GCCAGCGTGT CGCCGGTGTG
AGCCTCGATC CGCTGGAACG GTCCTACCGG CTTACCGCGA TGAGGTGGAA CGCATGA
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| Protein sequence | MTLPIHLTRR RALQLCAVGP AVAASAGLLA QPALSPLQIV GPWELGGLAP ANSGYIFTRM
QIAETLMEAR EDGTPLPGLA ERWGVSADGL AWRFTLRATA RFHDGTPVTA AAVVRCLQAA
RVAPALLSLA PIKSLDAEGA GVVLIRLASP YGGLPALLAH SSTMVLAPAS YGPDGRVRTI
VGSGPYRVVS LAPPQHVEAA AFDGYDGARP AVERVRYLAA GRAETRALMA EGGQADLAYG
LDPASLVRLR KRGQVRVDTV TLPRTVILKV NAGLPALKDL RVRQALSLCI DRAGIAKALL
RDPELAATQL FPPTLKAWHD PALAPLTHDP AAAARLLAEA GWRRAADGLR DASGQPLRLS
LRTFPDRPEL PVIASALQEQ WRQAGIAVQV GVGNSGDIPL GHRDGSLQLG LAARNYATVP
DPTGTLMQDF GASGGDWGAM GWTSDALVKA LSELSLGPSS AERTARLRAQ VAAVLQAELP
VIPIAWYRQQ VAVSQRVAGV SLDPLERSYR LTAMRWNA
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