Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2057 |
Symbol | |
ID | 7972459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2201176 |
End bp | 2202015 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644792653 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002943967 |
Protein GI | 239815057 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0800707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCCG TCCCGTCACG CACAACACCG GCCGAGCGCG ACCCCGCCTG GGCGCACCGC GTGTTCTGGC TGCTGGCCGC GGCCGTGGTG CTGTGGCCGA TGCTCGTGCT GACCGAATTC AAGCCCTGGC TGCTGCTGGC GCCCGGCGGC ATGGAGCCGG CACTGCAATT TCTGGCCGGC TTCGTGCCGC CGCGCATGGA CGCGGAGTTC CTGGCGCTGG TGGCGCGGGA AACCTGGCGC ACGGTGGCCA TTGCCACGGC CGGGCTCACG CTGGCCATGG TGCTGGCGGT TCCGCTCACG CTGCTGTCGG TGCGCTCGCT CTCCATCTCC GGCTTGGCCG GCCGCATGGC GGCGCTGCCG GCGGTGCTGC GCTTTTCGGT GCGCGGCCTG CTCATCGTGC TGCGCAGCGT GCCGGAACTC ATCTGGGCGC TGGTGTTCGT GCGCGTGGTC GGGCTGGGCG TCACGGCCGG CGTGCTGGCC ATCGCGCTGA CCTATGCCGG CATGCTGGGC AAGGTCTACG GCGAGATACT GGAGAGCGGC GATGCCCATC CGACCGAGAC GCTGCTGCGC AACGGCGCCG GCCGCATCCA GGCCTTTTTC TACGGCCTGC TGCCGCAGAA CGCGGCCGAG CTCACCAGCT ACACCGTCTA TCGTTGGGAG TGCGCCATCC GCTCGTCCGC GGTGCTCGGC TTCGTGGGCG CGGGCGGGCT CGGCCAGCAG ATGGATGCGT CGATGAAGAT GTTCAACGGC GCCGAGGTCA GCACCATGCT GCTGGTGTTC GTGCTGCTGG TCGCGGCCAC CGACCGGCTG AGCGCCTGGC TGCGGCGCGC CCTGGCCTGA
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Protein sequence | MAAVPSRTTP AERDPAWAHR VFWLLAAAVV LWPMLVLTEF KPWLLLAPGG MEPALQFLAG FVPPRMDAEF LALVARETWR TVAIATAGLT LAMVLAVPLT LLSVRSLSIS GLAGRMAALP AVLRFSVRGL LIVLRSVPEL IWALVFVRVV GLGVTAGVLA IALTYAGMLG KVYGEILESG DAHPTETLLR NGAGRIQAFF YGLLPQNAAE LTSYTVYRWE CAIRSSAVLG FVGAGGLGQQ MDASMKMFNG AEVSTMLLVF VLLVAATDRL SAWLRRALA
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