| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2054 |
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| Symbol | |
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| ID | 7972456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2198169 |
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| End bp | 2199419 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644792650 |
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| Product | protein of unknown function DUF323 |
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| Protein accession | YP_002943964 |
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| Protein GI | 239815054 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1262] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03440] conserved hypothetical protein TIGR03440 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.254941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCGA CATTGCCTGT TTATAGCGTG GCCGGTGCGC CCGAGGCACT CGCGCTGCGC
GCGGGGCCGC CGGCATCGGT GCGCGCGGCG CTGCTGGCTG CACGGCGGCG CACGCTCGAC
CTCGCGGACG ATTTCCGGGC CGCGCTGGGG GATGCCTATC CCGGCATCGG CTACGCGCCC
GAACTCAATC CGCCGCTCTG GGAGCTGGGC CACGTGGCCT GGTTCCAGGA ATGGTGGATC
GGCCGCAACC GGCAGCGCGC ACGCGGCGTG GCCTGCGAGC CGGACCACGC GCGCGAGCCT
TCGCTGCTGC CGCAGGCCGA TGCCTGGTAC GACTCCAGCC GCGTGGCGCA CCGCACACGA
TGGGCGCTCC CGCTGCCCGA TGCCGAGGCC ACGCGCGGCT ACCTCGAACG CACGTTTGCG
CAAACGTTGG CACTGCTGGA CGAGCTTCCG CCCGATGCGC ACGACGATGC GCTGTACTTC
TTCCGCCTGG TCGCCCTGCA CGAGGCCATG CACGCGGAAG CGGCGGCCTA CATGGCCGAA
GGCCTGGGCA TCTCGCTGCG CGAGGGCGGG CCCGGGCCGC AGCTTGCGGA GGATGCGGAA
CTGGAACTGC CGGCCCGGCG CTTTCGCATC GGCTCCGAGG CCGGCGCCGG CTTTGCGTTC
GACAACGAGC TGCTGCCGCA CGATGTCGCC ATCGGGCCAC TGCGCATCGA TGCGCAGGCC
GTGAGCTGGG CGCGCTTCCT GCCGTTCGTG GAAGCCGGCG GCTACGAAAA CCCGGCCTGG
TGGTCCGACG CGGGCCGCGG CTGGCTCGCG CGCCAGCCGC TGCGCCAGCC CGCCTGTCTT
CGTGCGGCGG GCACCGGTTG GCAGCAGCAG CGCGGCGGCC GCTGGCTGCC GCTCGGCCCG
CAGGCCGCTG CGGTCCACCT GAACGCGCAC GAAGCCGAGG CCTGGTGCCG CTGGGCCGGG
CGGCGGCTGC CGACCGAAGC CGAATGGGAG TGCGCGGCGC TCACGCTGCC GGGCTTCGCC
TGGGGCCGGG TCTGGGAATG GACCTCGAGC CCGTTCGAGC CTTACCCAGG CTTCGCGCCC
CATCCCTACC GCGACTACTC GGCGCCGTGG TTCGGCACCC GGCGGGTGCT GCGCGGCGCC
TGCCACGCCA CGTCGGCGGC GCTCGCGCAT GCGCGCTACC GCAACTTCTT CGAGCCGCAC
CGCCGCGACA TCTTCGCCGG CTTCCGCAGC TGCCGGGCCG CCGGCGGGTG A
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| Protein sequence | MDSTLPVYSV AGAPEALALR AGPPASVRAA LLAARRRTLD LADDFRAALG DAYPGIGYAP
ELNPPLWELG HVAWFQEWWI GRNRQRARGV ACEPDHAREP SLLPQADAWY DSSRVAHRTR
WALPLPDAEA TRGYLERTFA QTLALLDELP PDAHDDALYF FRLVALHEAM HAEAAAYMAE
GLGISLREGG PGPQLAEDAE LELPARRFRI GSEAGAGFAF DNELLPHDVA IGPLRIDAQA
VSWARFLPFV EAGGYENPAW WSDAGRGWLA RQPLRQPACL RAAGTGWQQQ RGGRWLPLGP
QAAAVHLNAH EAEAWCRWAG RRLPTEAEWE CAALTLPGFA WGRVWEWTSS PFEPYPGFAP
HPYRDYSAPW FGTRRVLRGA CHATSAALAH ARYRNFFEPH RRDIFAGFRS CRAAGG
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