| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2052 |
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| Symbol | |
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| ID | 7972454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2196116 |
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| End bp | 2197189 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792648 |
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| Product | selenophosphate synthetase |
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| Protein accession | YP_002943962 |
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| Protein GI | 239815052 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0709] Selenophosphate synthase |
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| TIGRFAM ID | [TIGR00476] selenium donor protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.752159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCTG CCCTCCCGCA AGCCCCCGCC GCCGAGCCCC GCCTCACCTC GCTGTCGCAC
GGCGGCGGCT GCGGCTGCAA GATCGCGCCC GGCGTGCTGT CGGAAATCCT CAAGGGCACG
GCGCGCATGC CGATGCCGCC CGAGCTGCTG GTCGGCATCG AGACGGCCGA CGACGCGGCC
GTCTACCAGC TCAACGACGA GCAGGCGCTG ATCGCCACCA CCGACTTCTT CATGCCGATC
GTCGACGATC CGTTCGACTT CGGCCGCATC GCGGCCACCA ACGCGATCTC CGACGTGTAT
GCGATGGGCG GCAAGCCGAT CCTGGCGCTC GCGCTGGTCG GCATGCCGAT CAACGTGCTC
AGCACGGCGA CCATCGGGCG CATCCTCGAA GGCGGCGAAT CGGTGTGCCG GGCGGCGGGC
ATTCCGATCG CGGGCGGCCA CACCATCGAT TCGGTCGAGG CCATCTACGG GCTGGTCGCG
CTCGGCCTGG TCCACCCGAA GCGCGTCAAG CGCAATGCCG GCGCCAAGGC CGGCGACCTG
CTGGTGCTGG GCAAGCCGCT GGGCGTGGGC ATCCTGTCGG CGGCGCTCAA GAAGGAGGCA
CTCGACGCGG CCGGCTACCA ACGCATGATC GCCACCACGA CGCGGCTGAA CACGCCCGGC
CCCGAGCTCG CGGCGCTCGA CGGCGTGCAT GCGCTGACCG ACGTGACGGG CTTCGGCCTG
GCCGGCCATG CGCTGGAACT GGCACGCGGC GCAAAGCTGT CGCTGGAGAT CGACTGGCAG
CAGGTGCCCG TGCTGGAAGG CGTGCGCGGC CTGGTGCAGT CGGGACACGT CACCGGCGCA
TCCGGCCGCA ACTGGGCCGG CTACGGCTCC GATGTGGCGC TGCCGCAGAA CTTTGCCGAG
GAAGAGCGCG CCCTGCTCAC CGACCCGCAG ACCAGCGGCG GACTGCTGGT TTCGTGCGCG
CCCGAGGCGC TCGACGAGGT GCTGGCCATC TTCCGCCGGC ATGGCTTCGA CGACGCCGCG
GTGATTGGCA CTGCCAGCGC GCAAGGGAGC GCGCCGCGGC TGGTGATCCG CTGA
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| Protein sequence | MNAALPQAPA AEPRLTSLSH GGGCGCKIAP GVLSEILKGT ARMPMPPELL VGIETADDAA
VYQLNDEQAL IATTDFFMPI VDDPFDFGRI AATNAISDVY AMGGKPILAL ALVGMPINVL
STATIGRILE GGESVCRAAG IPIAGGHTID SVEAIYGLVA LGLVHPKRVK RNAGAKAGDL
LVLGKPLGVG ILSAALKKEA LDAAGYQRMI ATTTRLNTPG PELAALDGVH ALTDVTGFGL
AGHALELARG AKLSLEIDWQ QVPVLEGVRG LVQSGHVTGA SGRNWAGYGS DVALPQNFAE
EERALLTDPQ TSGGLLVSCA PEALDEVLAI FRRHGFDDAA VIGTASAQGS APRLVIR
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