| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2049 |
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| Symbol | |
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| ID | 7972451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2193697 |
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| End bp | 2195256 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792646 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_002943960 |
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| Protein GI | 239815050 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACATCT TCGAAAACGT GCTGCTCATG CTGGTCGCGG CCTGCCTGCT GCTGCAGCTT
TCGCGGCGCC TCGCGCTGCC CTACCCGTCG ATGCTGGCGC TGGCCGGCGT GGCGCTGGGC
GCGATGCCCT GGGTGCCGCA CATCAGCCTC GATCCGCACC TGGCGCTCGC GCTTTTCATC
GCGCCTGCAC TGCTCGACTC GGCCTTCGAC ACCGCGCCGC GCGAGCTGCG CCGCAACTGG
CTGCCGCTGG TTTCGCTGGT GCTGGTGGCC GTGCTGCTGA CCACCGCCGC GGTGGCATGG
GCCGGCTGGG CATTCGCCGG CCTGCCGCTG GCCGCGGCCA TCACGCTCGG CGCCATCGTC
GCACCGCCCG ATGCGGTGGC CGCCGCGGCG GTGATGCAGC AGTTCCGCAT TCCGCGGCGC
ACGCTGTCGG TCATCAACGG CGAAAGCCTG CTCAATGACG CCGTCGCACT GCTGGTGTTC
GGCGTGGCGG TGTCGGCCGC AGGCTCGGCG CACCTGCCGA TCACCAGCTC GCTGCCGATG
CTGCTGGTTG CAGTGCCGGG CGGCGCGCTG GTCGGCATCG TGTTCGCCAA GCTCAACCTG
CACGTGGGCG CACCGCTCTT TGCCGGCACG CGCTCGGCCA TCATCTTCCA GTTCGTCATG
ACCTTCGGCG CATGGATCGT GGCCGAGCGG CTGCACCTGT CGCCGATCAT CTCGGTGGTT
GCGTTCGGCA TGACGCTGGG CCAGTACGCG CCGGGCCGCA ACGCGCCGCG CGACCGCGTG
CATTCCTACG CGGTGTGGGG CGCGGTGGTG TTCACGCTCA ACGTGCTCGC GTTCTTCCTG
ATGGGCCTGC AGGCACGCGG CATCGTCGAC CGGCTTTCGG GGCCCGCGCT TGCGCACGCG
CTGCAATTCG CGGGCATCGT GCTGGCGCTG GTCATCGCCG TGCGTGTGGG CTGGGTGCTG
TTCTACGGTG CGGTGATGCG CGCGGCCAAG CACCGGCTGG GCTTCAAGCC CCGGCGCATC
GCGATTCCGT CGAAGCGCAT CGGGCTGCTG GTGGGATGGT CGGGCATGCG TGGGCTGGTC
ACCATGGCCA CGGCCTTCGC GCTGCCGACC GACTTTCCGG GACGCGACCT GATCGTGCTG
AGCGCGTTCG CGGTCGTGCT CGGCACGCTG GTGATCCAGG GCTTCACGAT CGGGCCGCTG
ATCAGGGCCT TGAGGATCGC GCCCGATGCA TCGCTCGAAG AAGAGATCTC GCTCGCGCGC
ACCGCCATGA TGGATGCGGC GCTGTCTGCG CTCGAAGCCG AGAACGGCAC CGAGGCCGAG
GCCGTGCGCG ACGAGTACCG CGCGGCGCGC GTGCTGGCGT CGGACACGGC CGAGCCGCAG
GCGAAGACGG CGCACGACCG CCTGCGCGCC ACGGCCATCC GCGCGCAGCG GCAGGCACTC
GACGGCCTGC GCGCGAGTGG CCGGATCGAG GACGACACCT ACCACCGGCT CGAGGAGGAG
ATGGACTGGG CCGAGCTCAA TGCGATCCCG GCCGCCGACG TGCGCCTGCA GAGCGTCTAG
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| Protein sequence | MDIFENVLLM LVAACLLLQL SRRLALPYPS MLALAGVALG AMPWVPHISL DPHLALALFI
APALLDSAFD TAPRELRRNW LPLVSLVLVA VLLTTAAVAW AGWAFAGLPL AAAITLGAIV
APPDAVAAAA VMQQFRIPRR TLSVINGESL LNDAVALLVF GVAVSAAGSA HLPITSSLPM
LLVAVPGGAL VGIVFAKLNL HVGAPLFAGT RSAIIFQFVM TFGAWIVAER LHLSPIISVV
AFGMTLGQYA PGRNAPRDRV HSYAVWGAVV FTLNVLAFFL MGLQARGIVD RLSGPALAHA
LQFAGIVLAL VIAVRVGWVL FYGAVMRAAK HRLGFKPRRI AIPSKRIGLL VGWSGMRGLV
TMATAFALPT DFPGRDLIVL SAFAVVLGTL VIQGFTIGPL IRALRIAPDA SLEEEISLAR
TAMMDAALSA LEAENGTEAE AVRDEYRAAR VLASDTAEPQ AKTAHDRLRA TAIRAQRQAL
DGLRASGRIE DDTYHRLEEE MDWAELNAIP AADVRLQSV
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