Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2048 |
Symbol | |
ID | 7972450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2191910 |
End bp | 2193700 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644792645 |
Product | acetolactate synthase, large subunit, biosynthetic type |
Protein accession | YP_002943959 |
Protein GI | 239815049 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.979203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACTGC TCGACCTTCC CCTCACGCCT TCCCCGTCCC TCCATCCCGA AGTCCCAGGC GCCGCCTTCC GCGTGCGCAA CGGCGCCGAG GCCCTGCTCG ACACGCTGGT CGAGTGCGGC GTCGACACCA TCTTCGGCTA CCCGGGCGGC GCCGCGCTGC CGCTGTACGA CGCGCTGCAT GGCGAACCGC GGCTGCGCCA CGTGCTGGTG CGCCATGAGC AGGCCGCGGT GCATGCGGCC GAGGGCTATG CGCGCAGCAC GGGCCGCGTG GGCGTGGTGC TGGTCACCTC GGGGCCGGGC GTGGGCAACA CCATCACGGG GCTGCTCGAT GCCATGAGCG ATTCGGTGCC GGTGCTCTGC ATCAGCGGGC AGGTCGCGAC CGCGGTGATC GGCACGCAGG CCTTCCAGGA GAGCGATGCG CTGGGCATGT CGCGCCCCGT CACCAAGTGG AACCAGCAGG TGCGCGCGGC GGACGACGTG CCTTCGCTGG TGCGCCGCGC GCTGGAGATC GCCGCCTCGG GCCGGCCGGG GCCGGTGCTG CTCGACGTGC CGAAGGATGT CCAGCTCGCG CGCCTCGCGC ATGGCACTGC GCCAAAGCCG CTGAGGGCGC TGCGCACGGG CAGGGCGGCG CTGCCGCCGA AGGCCATGCT GCAGCGCGCG GCCGACCTGC TCTCGACCGC GCGCCGGCCG GTGCTCTACG GCGGCGGCGG GCTGATCAAC TCGGGGCCGG CCGCCTGCGA GGCCTTCGCG CAGCTGGTGC AGCGCCTGCA TGCGCCGTGC ACGCTCACGC TGATGGGGCT CGGCGCCTTC CCCGCGTCCG ACCCCAAATT CATCGGCATG CTGGGCATGC ACGGGATGCT AGAAGCCAAC CTTGCGATGC ACGAGGCCGA CCTGGTGGTG TGCGTCGGTG CGCGCTTCGA CGACCGCGTG ACGGGCAAGC TCGACGAGTT CTGTCCGCAT GCGCGCAAGA TCCACATCGA TATCGACCCC GGCAGCATCA ACAAGGTGGT GATGGTCGAT GTGCCGATGG TGGGCGACTG CGCCGCGATC CTCGATGCCG TGCTCGCGCT GCTGCCGGCC GAAGGCCTTG CGCCCGAACG GCTCGCGCCC TGGTGGGAGC GGATCGAGCG CTGGCGCGCG CAAGAGTGCC TGCGCTTCGC GCCGCGTGGC GACGCCATCC TGCCGCAGCA GCTGATGTCG TCGCTGCAGC GCGCCATCGC GGGCCGCGAC GCGATCGTCT CCACCGACGT GGGCCAGCAT CAGATGTGGG CCGCGCAGTA CCTGCGCTTC GACCGCCCGC GCCGCTGGCT CACCTCGGGC GGCGCCGGCA CCATGGGCTA CGGGCTGCCC GCGGCCATCG GCGCGCAGAT CGGCCACCCC GATGCGCTGA CGGTCTGCGT GAGCGGCGAC GCCTCGGTGC TCATGAACAT CCAGGAGCTG TCGACGGCGG TGCAGCACCG CGCGCCGGTG AAGCTGGTGC TGTGCAACAA CGGCTACATG GGCATGGTGC GGCAGTGGCA GGAGCTCAAC CACGGCAACC GGCTGAGCCA CAGCTGGAAC GAGGCGCTGC CCGATTTCGT GGCGCTGGCC AAGGCCTTCG GCTGGGGCGC GCGCCGCGTG TCGGACCCCG CCGAACTCGA AGCCGCGCTG GCCGAATGCC TGGCCAGCGA AGGCCCGTTC TTCCTCGACG TGCAGGTCGC CGCGCAGGAA AACTGCTTTC CGATGATGCC GGCCGGGCAG GGGCACCACC GCGTGATGCT GGCGAAGGAC CGCTGGTACG AGGAAGCCTA G
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Protein sequence | MRLLDLPLTP SPSLHPEVPG AAFRVRNGAE ALLDTLVECG VDTIFGYPGG AALPLYDALH GEPRLRHVLV RHEQAAVHAA EGYARSTGRV GVVLVTSGPG VGNTITGLLD AMSDSVPVLC ISGQVATAVI GTQAFQESDA LGMSRPVTKW NQQVRAADDV PSLVRRALEI AASGRPGPVL LDVPKDVQLA RLAHGTAPKP LRALRTGRAA LPPKAMLQRA ADLLSTARRP VLYGGGGLIN SGPAACEAFA QLVQRLHAPC TLTLMGLGAF PASDPKFIGM LGMHGMLEAN LAMHEADLVV CVGARFDDRV TGKLDEFCPH ARKIHIDIDP GSINKVVMVD VPMVGDCAAI LDAVLALLPA EGLAPERLAP WWERIERWRA QECLRFAPRG DAILPQQLMS SLQRAIAGRD AIVSTDVGQH QMWAAQYLRF DRPRRWLTSG GAGTMGYGLP AAIGAQIGHP DALTVCVSGD ASVLMNIQEL STAVQHRAPV KLVLCNNGYM GMVRQWQELN HGNRLSHSWN EALPDFVALA KAFGWGARRV SDPAELEAAL AECLASEGPF FLDVQVAAQE NCFPMMPAGQ GHHRVMLAKD RWYEEA
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