| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2042 |
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| Symbol | |
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| ID | 7972444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2185872 |
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| End bp | 2186843 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792639 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943953 |
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| Protein GI | 239815043 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.406961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAC GTTCCCTCAC CCTTTCGGCC GCCGCGCTGG CCCTGGTGCC GCTGCTGGGC
CACGCACAGC AGCAGGCCTT CCCGGAAAAG CCCATCACCT TCGTCGTGCC CTTTGCGGCC
GGCACCGCCA CCGACCAGAT CGCGCGTGCG CTGGGCAACA GCATCACGGC CGAAACGAAG
CAGCCCGTGG TGATCGACAA CAAGGCCGGC GCGAGCGGCT TCATCGCCTC GCAGCAGGCG
GCCAAGGCGC CGGCCGATGG CTACACCGTG CTGATCACCA CCAACACCAC GCATGCCGCC
AATGAGCACC TGTTCAAGAA GCTGCCCTAC GACCCGGTGA AAGACTTCGC GCCCGTCACC
GCACTCGGCA AGGGCGGCCA GATCATGGTG GTGAACCCGT CGTTCCCTGC GAAGAGCGTG
GCCGAGTTCG TGGCGCTCGC GAAGAAGGAG CCGGGCAAGT ACAGCTTCGG CAGCGGCAGT
TCGTCCAGCC GCATGGCGGG CGAGCTGCTG CAGCAGATGG CCGACATCAA GCTGCTGCAC
GTGCCCTACA AGAGCAATAC GCTGGCCGTC ACCGACCTGC TGGGCGGCCA GATCCACATG
ATGATCACCG ACGCGGCCAC CGGCCTGCCG CAGGTCAAGG CCGGCAAGCT GCGCGCGTTG
GGCGTTTCGA GCGCCGCGCG TTCGCCGCTC GCACCCGAGG TGCCCACCAT CTCGGAAGCC
GGCGTGAAGG GCTACGAGAT GGGCTACTGG TTCGCGGCCT ATGCGCCTGC GAAGACGCCG
CCGGCCGTGG TCAAGCGGCT CAACGAGCTG CTGGTGAAGG CCGCGAAGAG CGAGTCCGCG
AAGACGGCTT TCTACGAGCC CACCGGCACC GAGGTGTTCA CCACCTCGCC CGAAGAGCTC
GCCAGGTTCC AGACGGCCGA GTCGCAGAAA TGGGGCCGCA TCGTGAAGGC GGCCGGCATC
GAAGCCGAGT AG
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| Protein sequence | MKRRSLTLSA AALALVPLLG HAQQQAFPEK PITFVVPFAA GTATDQIARA LGNSITAETK
QPVVIDNKAG ASGFIASQQA AKAPADGYTV LITTNTTHAA NEHLFKKLPY DPVKDFAPVT
ALGKGGQIMV VNPSFPAKSV AEFVALAKKE PGKYSFGSGS SSSRMAGELL QQMADIKLLH
VPYKSNTLAV TDLLGGQIHM MITDAATGLP QVKAGKLRAL GVSSAARSPL APEVPTISEA
GVKGYEMGYW FAAYAPAKTP PAVVKRLNEL LVKAAKSESA KTAFYEPTGT EVFTTSPEEL
ARFQTAESQK WGRIVKAAGI EAE
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