Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2041 |
Symbol | |
ID | 7972443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2185456 |
End bp | 2185824 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644792638 |
Product | hypothetical protein |
Protein accession | YP_002943952 |
Protein GI | 239815042 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.448416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACAT CGACCGGCGA CATGATCGAA GTGCCGCTCT ACCGCGCGGC CCACGGCCGC ACCGGCGACA AGGGCGACCG CTCCAACATC AGCGTGATCG CCTGGCACGC GGATCTGTAT GCCTTGCTGG CCGAACAGCT CACGCCCGAG CGCGTGTCGA TGCAGTTCCG CCACCGCGCA CCGGCGCGGG TGCAGCGCTT CCTGCTGCCC CGGCTGCATG CGATGAACTT CGTGCTCGAC GCGGTGCTCG ACGGCGGCGT CAACGATGCG CTGAACCTCG ATGCGCACGG CAAGGCGCTG TCTTTCCTGC TGCTCGACAT GCCCATCCGC GTGCCGCGCG CGCTCGTGCC GCTGCTGGCG GGGCCGTAG
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Protein sequence | MNTSTGDMIE VPLYRAAHGR TGDKGDRSNI SVIAWHADLY ALLAEQLTPE RVSMQFRHRA PARVQRFLLP RLHAMNFVLD AVLDGGVNDA LNLDAHGKAL SFLLLDMPIR VPRALVPLLA GP
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