| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2040 |
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| Symbol | |
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| ID | 7972442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2184038 |
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| End bp | 2185459 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644792637 |
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| Product | protein of unknown function DUF1446 |
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| Protein accession | YP_002943951 |
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| Protein GI | 239815041 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.378243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCGG GCTGCCTAAA GTCCGCCTCG ATGAATGCCA ATGCACCGCC TCCACTGCTG
ATCGGCTGCG CGGCCGGATT TTCCGGCGAC CGCACCGATG CGGCTGGGCC GGTGGTCGAC
ACGCTGATCG CGCGGCTCGC CGGCGGCCCG GCCGGCCAGC GCGCCTTCCT GATCTTCGAG
ACGCTGGCCG AACGCACGCT CGCGCTCGCC CAACTGCGCC GCCGCGACAA CCCCGACGCC
GGCTACGAGC CCTTGCTCGA CGCCATGCTG CGGCCCGTGC TGGCGCGCTG CCTCGCGCAC
GGCATCCGCA TCGTGAGCAA CTTCGGCGCG GCCAACCCGC GCGCCGCGGC CCGCCACATC
GCCCGCATGG CGCGCGAACT GGGCGCCGAT GCGCCGCGCA TCGCGGTGGT CGAGGGCGAC
GATCTTTCGG GCCCTGCGCA CCGCGCGCTC TTGCATGAAA CGCTGGGCGC GCAGATGGAG
GGCCTGCGCA TCGTCAGCGC CAATGCCTAC ATCGGCGCCG AGCCGATCGC CGCCGCGCTC
GACGCCGGCG CGCAGATCGT GGTGTGCGGC CGCGTGGCCG ACCCTTCGCT TGCGGTCGGC
CCCGCCATGT CGCACTTCGG CTGGCGCGCC GACGACTGGC ACCGGCTGGG CCGCGCCACC
ATGGCGGGCC ACCTGCTCGA ATGCGGCGCG CAGGTGTGCG GCGGCTATTT CGCCGATCCG
GGCTACAAGG ACGTGCCGGG GCTCGACAAC GTGGGCTTCC CGATTGCCGA GATCGATGCC
GACGGCCAAT GCACCATCGG CAAGGCCGAC GGCACCGGCG GCCTCGTGAG CGAAGCCACC
GTGAAGGAGC AACTGCTCTA CGAAGTGCAC GACCCGAGCG CCTACCTCAC GCCCGACGTG
GTGGCCGACA TCGCCGAAGC CGAGGTGCGC GCGCTGCCCG GCAGCGATCG CGTCGAACTC
TCCGGCGTGC GCGGCCACGC GCGGCCGAGC CATTACAAGG TCAACGTCTG CCACGAAGGC
GGCTGGCTCG CCGAGGGAGA AATCTCCTAC GCGGGCCCGC GTGCCGAGGC GCGCGCCCGG
CTCGCGGCCG AGGTGCTGCG CAAGCGGCTC GACGGGCTGG CGCTGCGCGT GGACCTGATC
GGTGCGCTGA GCATCCTGGG CGACGACGCC GGCCGCATGC TCGCGGACAC GCCCGACACG
GGCCTGCGCG ACGTGCGCCT GCGCGTGGCG GCCACGCATG CGGAGCGCGC GCAGGCCGAG
CGCCTGGCGC GCGAGGTCAT GGCGCTCTAC ACCTGCGGAC CCGCGGGCGG CGGCGGCGTG
CGCACAGCGC TCACGCCGCG GCTCAACACC CTGTCGTGCC TGCTGCCGCG CGAAGCGGTG
CCGGTGCGCT TCGAACTGCT CGGCGCAGAG GCCCTGGCAT GA
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| Protein sequence | MMAGCLKSAS MNANAPPPLL IGCAAGFSGD RTDAAGPVVD TLIARLAGGP AGQRAFLIFE
TLAERTLALA QLRRRDNPDA GYEPLLDAML RPVLARCLAH GIRIVSNFGA ANPRAAARHI
ARMARELGAD APRIAVVEGD DLSGPAHRAL LHETLGAQME GLRIVSANAY IGAEPIAAAL
DAGAQIVVCG RVADPSLAVG PAMSHFGWRA DDWHRLGRAT MAGHLLECGA QVCGGYFADP
GYKDVPGLDN VGFPIAEIDA DGQCTIGKAD GTGGLVSEAT VKEQLLYEVH DPSAYLTPDV
VADIAEAEVR ALPGSDRVEL SGVRGHARPS HYKVNVCHEG GWLAEGEISY AGPRAEARAR
LAAEVLRKRL DGLALRVDLI GALSILGDDA GRMLADTPDT GLRDVRLRVA ATHAERAQAE
RLAREVMALY TCGPAGGGGV RTALTPRLNT LSCLLPREAV PVRFELLGAE ALA
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