| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2039 |
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| Symbol | |
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| ID | 7972441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2183013 |
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| End bp | 2183981 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792636 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943950 |
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| Protein GI | 239815040 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.40361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGA GCAAGCTCGC CGCATTCCTC CTTGCCTGCG CATCGGCAAT GGCCGCTTCC
GCCCAGGAGT GGCCGACCAA GCCCGTGCGC CTGATCGTTC CCGCGCCCGC CGGCAGTTCG
CTGGACCTGA TCGCGCGCAC GCTGGCCGAC CGGCTGCGCC CCCTGTGGAA GCAGCCCATC
GTGATCGAGA CCAAGGCCGG CGCGGGCGGC CTGATCGGCA TGGACGCCGT GGCCAAGGCG
CCGAACGACG GCCATACATT GGGCATCGGC TTCAACGGAC CGATCGCCTT CGGCCCCTAC
ATGTACAGCC GCATGCCGTA TGCGCCCGCA CGCGACCTGA TGCCGATCGT GCTCACCACC
TCGCAGCCCA ACGTGCTGGC GGTGCAGGCC GGCAACCCTG CCAACACGCT GCCGGAATTC
GTGGCGTGGG CCAGGAAGCA GGGCCACCCG TTCAGCTATG CGTCGGTGGG CGCGGGGAGT
TCATCGCACC TGACGATGGA ACTGTTTCGC AGCGTGGCCG GCATCGAGGC GGTGCACGTG
CCCTATGCCG GATCGCCGCC GGCGGGCCTT TCGGTGGCGG CCGGCGACAC GCAGGCGCTG
TTCACCGTGG CACCGGCGCT GCTGCCGCTC GTGCAGGGCA AGCGCATCAA GCTGCTCGCG
GTCACGAGCG CGAAGCGCTC CGAGCTCATG AAGGACCTGC CCACCGTGGC GGAGTCGGGC
TATCCGGGCT TCGAGTCGCT GGCCTGGAAC GGCCTCTTCA GCGCGAGCGG CACGCCGCCC
GAGGTGGTTC GCCGCATCAA TGCCGATGTG AACACGGTGC TGCAGGAGCC CGCCGTGCGC
GAACTGCTGG CCAACCAGGG CCTGGTGGCG GGCGGCGGCT CCGCCGAGGA GTTCGGCTCG
TTCATCGACA GCGAGGGCCG CAAATGGGGC GCGATCATCG CCAGGCGTGG CATCCGGCTC
GACCAGTGA
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| Protein sequence | MNKSKLAAFL LACASAMAAS AQEWPTKPVR LIVPAPAGSS LDLIARTLAD RLRPLWKQPI
VIETKAGAGG LIGMDAVAKA PNDGHTLGIG FNGPIAFGPY MYSRMPYAPA RDLMPIVLTT
SQPNVLAVQA GNPANTLPEF VAWARKQGHP FSYASVGAGS SSHLTMELFR SVAGIEAVHV
PYAGSPPAGL SVAAGDTQAL FTVAPALLPL VQGKRIKLLA VTSAKRSELM KDLPTVAESG
YPGFESLAWN GLFSASGTPP EVVRRINADV NTVLQEPAVR ELLANQGLVA GGGSAEEFGS
FIDSEGRKWG AIIARRGIRL DQ
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