| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2035 |
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| Symbol | |
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| ID | 7972437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2179526 |
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| End bp | 2180884 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792632 |
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| Product | Homoserine dehydrogenase |
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| Protein accession | YP_002943946 |
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| Protein GI | 239815036 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCGCG ATCCAGTCCA GTCCCTCGAA CCCCTGCCCA GCCGCCCCGC GGCCATCCGT
GCGCTGCGCG TGGGGATGAT CGGCATCGGC ACCGTCGGCT CGGGCACATT CCGGGTGCTG
GCGCGCAACC AGGCCGAGAT CGCGGGCCGG GCGGGCCGGC CCGTCGAGCT GGTGATGGTG
GCCGCGCGCA ACCTGGTGCG CGCCGCCGCC ATCGTGGGCG CGGATGTTCC GCTCACGGAC
GACCCGCTGC GCGTGGCCAC CCATCCCGAT GTCGACGTGG TGGTGGAAGT GGCCGGCGGC
ACCGGCCCGG CGCGCGAATG GGTGCTGGCC GCCATCGCGC ACGGCAAGCA CGTGGTCACG
GCCAACAAGG CCTTGCTGGC GGTGCATGGC GCCGAAATCT TTGCCGCGGC CCGGCGGCAT
GGGGTGGCCG TGGCCTACGA GGGCGCAGTG GCGGTGAGCA TTCCCATTGT CAAGGCGCTG
CGCGAGGGCC TCGCGGCCAA CCGCATCGAG TGGGTGGCGG GCATCATCAA CGGCACCACC
AACTTCATCC TGAGCAAGAT GAGGGATGAA GGCCTGGACT TCGCAGCCGC GCTCGCGCAG
GCCCAGGCGC TCGGCTATGC GGAGGCCGAT CCGGCCTTCG ACATCGAAGG CATCGACGCC
GCGCACAAGC TCACGCTGCT GGCCGCCAAT GCCTTCGGCA CCACCGTGCG GCTTGCCGAT
GTGCAGGTGC AAGGCATCAC GGCACTCGAG CGGGTGGACG TGGCCTGTGC CGAGCAGCTG
GGCTACCGCA TCAAGCTGCT GGGCGTGGCG CGGCGCCGGG AGGAGGGCGT GGAGCTGCGC
GTGCAGCCCG CGCTGGTGCC CGCATCGCAC CTGATGGCGC ATGTGAGCGG GTCGATGAAC
GCCGTGATGG TCAAGGGCGA TGCGTCCGGC GTGACGATGT ACTACGGCGC CGGCGCGGGC
TCCGAACAGA CCGCATCGGC GGTGATTGCC GACCTGGTCG ATGTGGCGCG GCTGGACGGC
ACCCATGCCG CGCAGCGCGT GCCGCACCTG GGCTTCCATG CGCATGCGAT GAGCGCGTTG
CCGGCGTTGC CCCGCGCCGA GGCATGCGGC GCGCACTACC TGCGCATCCC CGTGCATGCC
GCCAGCCAGA TCGAGGCGGT GTCGGGCTGG CTGGCGGGGC AGCAGGTGCC GGTGCAGCAG
GTGGCGCTGG CGGCTGCGCA GCCCGGCATG GGCGCGCAGC TGCTGGTGCT CACGCAGCCG
GTGCGGCAGG GCACGATGGA CCTGGCGCTG CATGCGCTTC ATGCGCATCC CTCGGTCGCA
GGAAAGGTCA CGGCGCTGTG CGTGGAGGCG CTGGCCTGA
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| Protein sequence | MYRDPVQSLE PLPSRPAAIR ALRVGMIGIG TVGSGTFRVL ARNQAEIAGR AGRPVELVMV
AARNLVRAAA IVGADVPLTD DPLRVATHPD VDVVVEVAGG TGPAREWVLA AIAHGKHVVT
ANKALLAVHG AEIFAAARRH GVAVAYEGAV AVSIPIVKAL REGLAANRIE WVAGIINGTT
NFILSKMRDE GLDFAAALAQ AQALGYAEAD PAFDIEGIDA AHKLTLLAAN AFGTTVRLAD
VQVQGITALE RVDVACAEQL GYRIKLLGVA RRREEGVELR VQPALVPASH LMAHVSGSMN
AVMVKGDASG VTMYYGAGAG SEQTASAVIA DLVDVARLDG THAAQRVPHL GFHAHAMSAL
PALPRAEACG AHYLRIPVHA ASQIEAVSGW LAGQQVPVQQ VALAAAQPGM GAQLLVLTQP
VRQGTMDLAL HALHAHPSVA GKVTALCVEA LA
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