Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2033 |
Symbol | |
ID | 7972435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2176997 |
End bp | 2178694 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644792630 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_002943944 |
Protein GI | 239815034 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCACA GCGTTTCCCT GATCAACACG ATTGCCGCCG GCCTGGGGCT GGCGCTCGTG CTGGGTTTCC TGGCGCTGCG GCTGCGGCTG CCGGCGCTGG TGGGCTACCT GCTCGCGGGC GTGATCATCG GGCCCTTCAC GCCGGGCTTC GTGGCCGATG CGGGCATTGC GGCGCAGCTG GCCGAGATCG GCGTGATGCT GCTGATGTTC GGCGTGGGCC TGCATTTTTC GCTCGACGAC CTGCTGGCGG TGCGCAAGAT CGCGCTGCCG GGCGCACTCG CGCAGATCGC GGTGGCCACG CTGCTGGGCG GTGCGCTGGC GCTCTGGTGG GGCTGGTCAT GGGGCGAGGC GCTGGTCTTC GGCCTGGCGC TGTCGGTGGC AAGCACGGTC GTGCTGCTGC GCGCGCTCGA GAGCCTGGGC ATTCTCGATT CGTTCACCGG GCGCATCGCG GTCGGCTGGC TGGTGGTCGA GGACCTGGCC ATGGTGCTGG TCCTGGTGCT GATGCCGCCG CTCGCGGGGG CGCTGGGCGG CCAGGCGGGC GATTCGGCCA ACGCCGATCC GCTGTGGCAG ACGCTCGGCG TCACGCTGCT GCAGGTGGGC GGGTTCGTGG CGCTGATGCT GGTGGTGGGG CGGCGCGCGT TTCCTTGGAT TCTCTGGCAG GTCACGCGCA CCGGCTCGCG CGAGCTGTTC ACGCTGTGCG TGATCGCGGC CGCAGTCAGC ATCGCCTTTG CGTCGGCGGC GCTGTTCGGC GTGTCGTTCG CGCTGGGCGC TTTCTTCGCG GGCATGGTGA TGCGCGAATC CGAATTCAGC CACCGCGCGG CGCAGGAGTC GCTGCCGCTG CGCGATGCCT TCGCGGTGCT GTTCTTCGTG TCGGTGGGCA TGCTCTTCGA TCCCTCGGTG CTCGTCGATC GGCCGCTGCA GGTGCTGGCG GTGGTGGGCG TGATCGTGCT GGGCAAGTCG CTGGCCGCCT GCGCGCTGGT GCTGGCGTTC CGCTATCCGC TGGGCACGGC GCTCACCGTG AGCGCGAGCC TTGCGCAGAT CGGGGAGTTC TCGTTCATTC TTGCGGGGCT CGGCGTCTCG CTCGGCCTGC TGCCGGTGGA AGGGCAGAGC CTGATCCTGG CCGGCGCGCT GATTTCCATT GCCACCAATC CGCTGTGGTT CAGCCTGGTC GCACCGATCG AGAAATGGCT GCACGGCCGC TTCCCGGCGG CGCGCAGCCT CGAATCGCAC GACCATCCGC TGGCCGAACT GCCGACCACC ACCGAAGCCC GTTACCTGTC CCGCCAGGTG GTGCTGGTGG GCTATGGCCG CGTCGGGCGC CGCATCGCGT CCGAGCTGGA GGCGCACGAC ATTCCCTACG TGGTGGCGGA GCAGAACCGC GAGCTGGTCG AGAAGCTGCG CGAGGCCGGC GTGGCGGCCG TCTGGGGCGA CGCGGCCGAT CCGGCCGTGC TGATCCAGGC GCACATCGCG CGTGCCCGCG TGCTGGTGGT GGCCATCCCG GACGCCATGA ACGTGCGGCA GATGATGGAA ACCGCCCGCA CCCTCAATCC GGCCATCGAA ACCGTGATCC GCAGCCACAA CGAGGAAGAA GCCGGGCTGC TGACCCGCGA GATGGCCGCC ACGGTCTTCC TGGGCGAACA GGAACTCGCG CAGGCCATGG CGCGCGACGT GGTGCGGCGC GCAGCGGCGG CCGCCTGA
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Protein sequence | MPHSVSLINT IAAGLGLALV LGFLALRLRL PALVGYLLAG VIIGPFTPGF VADAGIAAQL AEIGVMLLMF GVGLHFSLDD LLAVRKIALP GALAQIAVAT LLGGALALWW GWSWGEALVF GLALSVASTV VLLRALESLG ILDSFTGRIA VGWLVVEDLA MVLVLVLMPP LAGALGGQAG DSANADPLWQ TLGVTLLQVG GFVALMLVVG RRAFPWILWQ VTRTGSRELF TLCVIAAAVS IAFASAALFG VSFALGAFFA GMVMRESEFS HRAAQESLPL RDAFAVLFFV SVGMLFDPSV LVDRPLQVLA VVGVIVLGKS LAACALVLAF RYPLGTALTV SASLAQIGEF SFILAGLGVS LGLLPVEGQS LILAGALISI ATNPLWFSLV APIEKWLHGR FPAARSLESH DHPLAELPTT TEARYLSRQV VLVGYGRVGR RIASELEAHD IPYVVAEQNR ELVEKLREAG VAAVWGDAAD PAVLIQAHIA RARVLVVAIP DAMNVRQMME TARTLNPAIE TVIRSHNEEE AGLLTREMAA TVFLGEQELA QAMARDVVRR AAAAA
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