| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2028 |
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| Symbol | |
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| ID | 7969821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2172109 |
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| End bp | 2172996 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644792625 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_002943939 |
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| Protein GI | 239815029 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2301] Citrate lyase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCACGG CAGCGCTCGC GCTGGCGCGC GCCTTTCTCT TCGTGCCGGC CGACCGGCCC
GAGCGCCACG CGCGCGCGCT GGCCACCGGC GCGGGCGGGG TGATCGTCGA CCTGGAGGAT
GCGGTGGCGC CCGAGCGCAA GGCCGCGGCG CGCGAAGGCC TCGCGGCGTC GTTCGCCGCG
CTGCCCGCGG CCGGCCGGCA GCGCCTGCTG GTGCGCATCA ATGCCGCAGG CACGCCGTGG
CACGAGGACG ACTGCGCGGC CGTGGCCGGG CTGGTCTTGC AGGGGCTGAT TGCGGGCGTG
GTGCTGCCCA AGGCGGAGCG GGGCGGCGAC CTGCGGCTGC TGGCCGAAGC CATCGGCCCC
CGAGGCGTGC TCGTGCCGCT CGTCGAATCG GCGGCCGGGC TTGCGGCGGT TGATGAACTC
GCGGCGGCGC CACAGGTGCT GCGGCTCGCC TTTGGCAACC TCGATTTCCA GGCCGATGTC
GGGCTGGCCT GCGATGCGGA CGAAGCCGAG CTGGTGCCGG TGCGCCTCGC GCTGCTGCTG
GCCTCGCGCC GCGCCGGGCT GCCCGCGCCG ATCGACGGCG TGACGGCCGA CTGGCGCGAT
GCGCAACGCC TGGCCGCCGA CACCGCACGC GCGCGGCGCG GCGGCTTCGG CGCCAAGCTG
TGCATCCACC CCGACCAGGT TGCGCCGGTG CAGGCCGCGC TCGGCCCGAG CGACAGCGAG
CTCGCATGGG CGCGCCGCGT GATCGAGGCC GTGCGGTCGG CTGGCGGCGG CGTCGCCAGC
CTCGACGGCC GCATGGTCGA CGCGCCGGTG GTTCGCCTGG CCGAACGGCT GCAGGCGCTC
GCTGCGGAAC AAGACAGCCA TCCAACAACC AAGGAGACAA GCAAGTGA
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| Protein sequence | MSTAALALAR AFLFVPADRP ERHARALATG AGGVIVDLED AVAPERKAAA REGLAASFAA
LPAAGRQRLL VRINAAGTPW HEDDCAAVAG LVLQGLIAGV VLPKAERGGD LRLLAEAIGP
RGVLVPLVES AAGLAAVDEL AAAPQVLRLA FGNLDFQADV GLACDADEAE LVPVRLALLL
ASRRAGLPAP IDGVTADWRD AQRLAADTAR ARRGGFGAKL CIHPDQVAPV QAALGPSDSE
LAWARRVIEA VRSAGGGVAS LDGRMVDAPV VRLAERLQAL AAEQDSHPTT KETSK
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