| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2027 |
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| Symbol | |
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| ID | 7969820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2170907 |
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| End bp | 2172112 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792624 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_002943938 |
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| Protein GI | 239815028 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TGGAAAACAC GTCCATGACA AGACCCCTCG ACGGCATCAC CGTGGTTTCG
CTCGAGCACG CGATCGCCGC GCCGTTCTGC ACCCGGCAGC TGGCCGACCT CGGCGCCCGC
GTCATCAAGG TGGAACGCCC CGGCGCCGGC GACTTCGCGC GCGCCTACGA CGCACGCGTG
GGCGGCGAGG CCTCGCACTT CGTGTGGGTG AACCGCTCCA AGGAAAGCCT CACGCTCGAC
CTCAAGCAGC CCGCCGCGCT CGCGGTGCTG CAGGCGCTGG TGGCCGATGC CGACGTGCTG
GTGCAGAACC TCGCGCCCGG CGCGGCCGCG CGCATGGGCC TGGGCGCGGA AGCGCTGCAG
GCCCTGCATC CGCGGCTCAT CGTCTGCGAT ATCTCGGGCT ACGGCGACGA CGGCCCGTAC
CGCGACAAGA AGGCCTACGA CCTGCTGATC CAGAGCGAGG CAGGCTTTCT CTCGGTCACG
GGCACGCCGG ACGATCCCTG CAAGTCGGGC AATTCCATCG CCGACATCGC GGCGGGCATG
TACGCCTACA CCGGCATCCT CGCGGCGCTG CTGCAGCGCG GCAAGACCGG CAAGGGCTCG
CACATCGACG TGTCGATGCT CGAATCGCTC GCCGAGTGGA TGGGCTACCC GATGTACTAC
GCCTACGAAG GCGCGCCGCC GCCGCCGCGC AGCGCGGCCT CGCACGCCAC CATCTATCCC
TACGGTCCCT TTCCCGCGGG CGACGGCGGC ACGGTGATGC TGGGCCTGCA GAACGAGCGC
GAATGGCGCG TGTTCTGCGA GAAGGTGCTG CAGCAGGCGG GGCTTGCCAC CGACGCGCGC
TTCGACAGCA ATGCGCGACG CAACGAGAAC CGCGACGCGC TGCGCGCGAT CATCGTCGAG
ACCTTTGCCG CGCTCGGTAC CGCGCAGGTG GTCGAGCGCC TCGATGCGGC GCAGATCGCC
AACGCACGCA TGAACGACAT GGCCGGGCTG TGGGCGCATC CGCAATTGCA GGCGCGCGAG
CGCTGGCGGC AGGTGGGCTC GCCGGCCGGC GACATTCCGG CGCTGCTGCC GGCCGGCCGC
CAGAGCGCCT TCGACTACCG CATGGACGCG ATACCGGCCG TGGGCCAGCA CACCGACGCC
ATCCTGCGCA GCCTGGGCCG CAGCGAGGCG GACATCGCGG CGCTGCGCGA GGCGGGGGCG
GTGTGA
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| Protein sequence | MKKMENTSMT RPLDGITVVS LEHAIAAPFC TRQLADLGAR VIKVERPGAG DFARAYDARV
GGEASHFVWV NRSKESLTLD LKQPAALAVL QALVADADVL VQNLAPGAAA RMGLGAEALQ
ALHPRLIVCD ISGYGDDGPY RDKKAYDLLI QSEAGFLSVT GTPDDPCKSG NSIADIAAGM
YAYTGILAAL LQRGKTGKGS HIDVSMLESL AEWMGYPMYY AYEGAPPPPR SAASHATIYP
YGPFPAGDGG TVMLGLQNER EWRVFCEKVL QQAGLATDAR FDSNARRNEN RDALRAIIVE
TFAALGTAQV VERLDAAQIA NARMNDMAGL WAHPQLQARE RWRQVGSPAG DIPALLPAGR
QSAFDYRMDA IPAVGQHTDA ILRSLGRSEA DIAALREAGA V
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