| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2025 |
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| Symbol | |
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| ID | 7969818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2169019 |
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| End bp | 2169993 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792622 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943936 |
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| Protein GI | 239815026 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.744071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTCC GCGCACTGGC GCTTCTTTCC CTTGCCGCGG CAGCGCTCTG CACTGCGGTT
CCGGCTGCCG CGCAGCCCTA CCCCTCGCGC CCCGTCACGC TCGTCGTGCC GCAGGCTGCG
GGCGGCACCA ACGACATCGT GGGCCGCCTC GTGGGCCAGA AGATCGGCGA GCTGATGAAC
GCGAGCGTGG TGGTCGACAA CCGGCCGGGC GCGGGCGGCA ACATCGGCAC GCAACTGGTC
GCCAAGGGCC CGAAGGACGG CTACATGCTG CTCATGACCA TCAGCAGCAG CCAGGCCATC
AACCCGGCGC TCTACAAGAA CCCGGGCTTC GATCCGGTGA AGGACTTCAA GCCCGTGGGC
CTGATCGGCG CGGTGCCCAA CGTGCTGCTG GTCAACCCCT CGTTTCCCGC GAAGGATTTC
AACGAGTTCC TGAAGCTCGC GCGGCAGAAG GGCGCCAACT ACCAGTACGC CTCGGCCGGC
AACGGCACGC TCAACCACCT GCTGGGCGAA ATGCTCAACA GCATGGCCGG TATCTCGCTG
CAGCACGTGC CGTACAAGGG CGTGGCGCCC GCACTCAACG ACGTGCTCGG CGGGCAGCTG
CCGATCGTGT TCGCGAGCCT GCCTTCGGCG CTCTCGCACA TCAAGGCCGG CAAGCTGCGC
GCGCTGGCCG TGAGCGGCGA GAAGCGCTCG CCAGTGCTGC CGGAGGTGCC TGCCATTGCC
GAGGCCGTGC CGGGCTACAA CGGCACGCTC TGGATCGGCC TGTTCGCGCC AGCGGGCGTG
CCGCCCGAGG TGCTCGCCAC GCTGCAGGAC GCGACGCGCA AGGCGCTGGC CGCGAAGGAC
CTGCGCGACA AGCTTGAACA GCAGGGCGTG GAGATCGCGG CGCCCACCAC GCCCGATCAA
TTCTCGAAAC TGCTGCAGGA CGACCTCGCC AAGTGGGCGC GCATCGTCAA GGCCTCCGGC
GCAGCAGTTG ACTGA
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| Protein sequence | MTFRALALLS LAAAALCTAV PAAAQPYPSR PVTLVVPQAA GGTNDIVGRL VGQKIGELMN
ASVVVDNRPG AGGNIGTQLV AKGPKDGYML LMTISSSQAI NPALYKNPGF DPVKDFKPVG
LIGAVPNVLL VNPSFPAKDF NEFLKLARQK GANYQYASAG NGTLNHLLGE MLNSMAGISL
QHVPYKGVAP ALNDVLGGQL PIVFASLPSA LSHIKAGKLR ALAVSGEKRS PVLPEVPAIA
EAVPGYNGTL WIGLFAPAGV PPEVLATLQD ATRKALAAKD LRDKLEQQGV EIAAPTTPDQ
FSKLLQDDLA KWARIVKASG AAVD
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