| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2024 |
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| Symbol | |
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| ID | 7969817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2167997 |
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| End bp | 2168908 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792621 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002943935 |
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| Protein GI | 239815025 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0238191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTTCG ACCTGACCGA CCTGCGCCTC TTCGTTGCCA CGGCCGAGCT CGGCAATCTC
ACGCGCGCGG CCGAGCGGCA GCACCTGTCG CTTGCGGCGG CCAGCGCGCG CATCAAGGCG
CTCGAAAACC AGGCCGGGCT GCAGCTGCTG CAGCGCGAAG CGCGCGGCGT GCGCCTGCTG
CCGCCGGGGG AAGCCTTCCT GCACCACGCG CGCCTCGTGC TGCACCAGAC CGAGCAGCTG
CGCGCCGACC TGCTCGAATA CGGCGGCGGC CTGCGCGGCC ACCTGCGCGT GTTCGCCAAC
ACCACGGCGG TGACCGATTT CCTGCCTGAA ATCTTGCCGG GCTTTCTTGC GCGCAATCCG
CGCATCAACG TCGACCTTCA GGAAAAACCG AATGCTCAGA TCCCGCGCGG CGTGCTCGAC
GGCCGCGCCG ACATCGGCAT CGTGGCGGGC CGCGTCGACA CGCTGGGCCT CGAAGCGATC
CACTTCAGCA CCGACCGGCT GGTGCTCGCC ACCTCGCGCA AGCACCGCTT CGCGAAGCGC
CGCAGGATTT CATTTGCGGA AACGCTCGAC GAAGACGCCA TCGGCATGCA GCAAGGCAGC
ACCTTGCAGA CCTTTCTGGC GCAGATCACC GACAACCTCG GCAAGCGGCA GAAGCTGCGC
ATCCAGCTCG GCAGCTTCGA CGCCATGTGC CGGATGATCG GCAGCGGCGT GGGCATTGGC
GTGGTGCCGG AGTCGGCGGC GCGGCGCAAT CAGGAAAGCA TGCGGCTCGC GCTGATCGAT
CTCAGCGACG CATGGTGCGT GCGGGAGCGC TACCTGCTGG TGCGCGACCG GGCGGCACTG
CCGATCTATG CGCAGGCGCT GGTCGAGACG CTGTGCCAGC ACTACGCCGT GGAGCAGGCC
GCTGCCGGCT GA
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| Protein sequence | MLFDLTDLRL FVATAELGNL TRAAERQHLS LAAASARIKA LENQAGLQLL QREARGVRLL
PPGEAFLHHA RLVLHQTEQL RADLLEYGGG LRGHLRVFAN TTAVTDFLPE ILPGFLARNP
RINVDLQEKP NAQIPRGVLD GRADIGIVAG RVDTLGLEAI HFSTDRLVLA TSRKHRFAKR
RRISFAETLD EDAIGMQQGS TLQTFLAQIT DNLGKRQKLR IQLGSFDAMC RMIGSGVGIG
VVPESAARRN QESMRLALID LSDAWCVRER YLLVRDRAAL PIYAQALVET LCQHYAVEQA
AAG
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