| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2020 |
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| Symbol | |
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| ID | 7969813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2163356 |
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| End bp | 2164123 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644792617 |
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| Product | protein of unknown function DUF152 |
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| Protein accession | YP_002943931 |
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| Protein GI | 239815021 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1496] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.511087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGACG CGCACTGGAT CGTGCCCGAC TGGCCGGCGC CGCCCAACGT GCGGGCCGTG
TGCACCACGC GCGAGGGCGG TGTCTCGCAG GGCCGCTACC AGAGCCTCAA CCTGGGCGAC
CACGTGGGCG ACCTGGCCGC CCACGTCGCC GAAAACCGCC ATCGCCTGGC GCAGGCCATC
GGCGGCGCGC GGCCGGTCTT TCTTCAGCAG GTGCACGGCA CCGGCTTGGT GGCGCTCGAC
GCCGAGGCGG GCGGGGCGGG CGACGGCACG CCGGCCGATG CCTGCACCGC CACGGCCACC
GGCGTGGCCT GCACCATCAT GGTGGCCGAC TGCCTGCCCG TGCTCTTCAC CGACGAATCG
GGCCAGCGGG TGGCGGCCGC GCATGCCGGC TGGCGCGGCC TGGCCGGCGG CGTGCTCGAG
GCGGCGGCCC GGTGCTTCGA GCCCGCGCAG GGCGGCGGCA GGGTCATGGC CTGGCTCGGC
CCGTGCATCG GGCCCCGTGC CTTCGAGGTC GGGCCCGAGG TCAAGGCCGC GTTCGAGGCG
CATGCGCCCG AGGCTGCGCG CTGCTTCCTG CCCGCGGCGG CGCCCGGCAA GTGGCTGGCC
GACCTGCCCG CGCTCGCGCG CCAGCGCCTC TGTGCAGCCG GCGTGGAATC GGTGCATGGC
AACGACGGCA GCGACGCGTG GTGCACCGTC GCCAACCCGT CACGGTTCTT TTCGCACCGG
CGGGACGGCG TCAGCGGGCG TTTCGCCGCG CTGGTCTGGA AGGCCTGA
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| Protein sequence | MDDAHWIVPD WPAPPNVRAV CTTREGGVSQ GRYQSLNLGD HVGDLAAHVA ENRHRLAQAI
GGARPVFLQQ VHGTGLVALD AEAGGAGDGT PADACTATAT GVACTIMVAD CLPVLFTDES
GQRVAAAHAG WRGLAGGVLE AAARCFEPAQ GGGRVMAWLG PCIGPRAFEV GPEVKAAFEA
HAPEAARCFL PAAAPGKWLA DLPALARQRL CAAGVESVHG NDGSDAWCTV ANPSRFFSHR
RDGVSGRFAA LVWKA
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