Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2019 |
Symbol | |
ID | 7969812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2162700 |
End bp | 2163341 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644792616 |
Product | maleylacetoacetate isomerase |
Protein accession | YP_002943930 |
Protein GI | 239815020 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | [TIGR01262] maleylacetoacetate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.70314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAGC TGCACAACTA CTTCCGATCC TCCTCGTCGT TCCGCGTGCG CATCGCGCTC CACCTGAAGG GCCTGGAGTT CGACTACATC CCGGTGCACA TCGCCCGCGG CGAGCACCGC ACGGGGCCGT TCTCGGCCAT TTCGGCCGAC ATGCTGGTGC CCCTGCTCGA GGACGAGGGC GAGCGCTTTT CGCAGTCGAT GGCCATCATC GAATACCTGG ACGAAACCCA CCCCGAGCCG GCGCTGCTGC CGCACGATCC GGTGGGCCGC GCCCATGTGC GCGCGCTGGC GGAATCCATC GCCTGCGAGA TCCATCCGCT CAACAACCTG CGCGTGCTCA AGTACCTGGT GAAGGAGCTC AAGCTCGACG ACGAGGCCAA GAACGCCTGG TACCGCCATT GGGTGCGCGA CGGCATGCTG GCCTTCGAGC GCCAGCTCGC GCAGCATCCC GGCGGCCGGT TCTGCTATGG CGACACGCCC ACGCTGGCCG ACTGCTGCCT GGTGCCGCAG ATCTTCAACG GCCGCCGCTT CGACTGCGAC TTCAGCGGGC TGCCGCGCAC CATGGCCGCC TTCGAGGCCT GCATGGAGCT CGACGCCTTC CAGCGCGCCC AGCCTTCGCA GTGCCCCGAC GCGGAAGCCT GA
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Protein sequence | MMKLHNYFRS SSSFRVRIAL HLKGLEFDYI PVHIARGEHR TGPFSAISAD MLVPLLEDEG ERFSQSMAII EYLDETHPEP ALLPHDPVGR AHVRALAESI ACEIHPLNNL RVLKYLVKEL KLDDEAKNAW YRHWVRDGML AFERQLAQHP GGRFCYGDTP TLADCCLVPQ IFNGRRFDCD FSGLPRTMAA FEACMELDAF QRAQPSQCPD AEA
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