Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2016 |
Symbol | |
ID | 7969809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2160830 |
End bp | 2161336 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644792613 |
Product | CreA family protein |
Protein accession | YP_002943927 |
Protein GI | 239815017 |
COG category | [S] Function unknown |
COG ID | [COG3045] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.894625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGG CCTCCCGCGC TCCCCTCCTC CTTCGCGGCG CCTTCGCATG CGGCCTGGCG CTGGCGGGCC TGGCGCTGGC CTTCGCCGCG CATGCGGAAA CGGTGGGCGA CGTGGACACC GCCTTCAAGC TCATCGGCCC CGATCACAAG ATCGTGGTGG AGGCCTACGA CGACCCCAAG GTGAACGGCG TGACCTGCTA TGTCTCGCGC GCCAAGACCG GCGGGCTGGC GGGCGCCTTC GGCGTGGCGG AGGACAAGTC GGAAGCCTCC ATTGCCTGCC GCCAGGTCGG GCCGGTCAGC ATCGTGCAGC CGCTTCCAAA GCGCGAAGAG GTCTACAGCG AGCGGCTGTC GATCCTGTTC AAGCGGCTGC GCGTGGTGCG CATGGTCGAC GCCAGGCGCA ACACGCTGGT CTATCTCACC TACTCCGACC TGCTGATCGA AGGCTCGCCG AAGAACAGCG TGACGGCGGT GCCGATCGAC CGCGGCACGC CCATTCCGCT CAAGTAG
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Protein sequence | MTQASRAPLL LRGAFACGLA LAGLALAFAA HAETVGDVDT AFKLIGPDHK IVVEAYDDPK VNGVTCYVSR AKTGGLAGAF GVAEDKSEAS IACRQVGPVS IVQPLPKREE VYSERLSILF KRLRVVRMVD ARRNTLVYLT YSDLLIEGSP KNSVTAVPID RGTPIPLK
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