Gene Vapar_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2016 
Symbol 
ID7969809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2160830 
End bp2161336 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content68% 
IMG OID644792613 
ProductCreA family protein 
Protein accessionYP_002943927 
Protein GI239815017 
COG category[S] Function unknown 
COG ID[COG3045] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.894625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGG CCTCCCGCGC TCCCCTCCTC CTTCGCGGCG CCTTCGCATG CGGCCTGGCG 
CTGGCGGGCC TGGCGCTGGC CTTCGCCGCG CATGCGGAAA CGGTGGGCGA CGTGGACACC
GCCTTCAAGC TCATCGGCCC CGATCACAAG ATCGTGGTGG AGGCCTACGA CGACCCCAAG
GTGAACGGCG TGACCTGCTA TGTCTCGCGC GCCAAGACCG GCGGGCTGGC GGGCGCCTTC
GGCGTGGCGG AGGACAAGTC GGAAGCCTCC ATTGCCTGCC GCCAGGTCGG GCCGGTCAGC
ATCGTGCAGC CGCTTCCAAA GCGCGAAGAG GTCTACAGCG AGCGGCTGTC GATCCTGTTC
AAGCGGCTGC GCGTGGTGCG CATGGTCGAC GCCAGGCGCA ACACGCTGGT CTATCTCACC
TACTCCGACC TGCTGATCGA AGGCTCGCCG AAGAACAGCG TGACGGCGGT GCCGATCGAC
CGCGGCACGC CCATTCCGCT CAAGTAG
 
Protein sequence
MTQASRAPLL LRGAFACGLA LAGLALAFAA HAETVGDVDT AFKLIGPDHK IVVEAYDDPK 
VNGVTCYVSR AKTGGLAGAF GVAEDKSEAS IACRQVGPVS IVQPLPKREE VYSERLSILF
KRLRVVRMVD ARRNTLVYLT YSDLLIEGSP KNSVTAVPID RGTPIPLK