| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2010 |
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| Symbol | |
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| ID | 7969803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2153200 |
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| End bp | 2155626 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792607 |
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| Product | Catalase |
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| Protein accession | YP_002943921 |
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| Protein GI | 239815011 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0753] Catalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCCTT CCAGAACACC TTCTCCTCCC GAATCCGGCA GCGCCGCCAC CAGCGCAGCG
GCGGCCGCCC GCAACACCGA CAGCGGCGCC GCGCACCTGC CGGGGGGGCC GCCGCCCGAT
CCGCCCTCGC AAAAAGCCGC GCATGCGCAG GCGCTGGCCG CAGGCATGCC TTTCAATGCG
AACAAGCCGT TGGAGCACGG CATGGACAAC GCGCTGCGCC CGCCCGCCGG CCAGACCGTG
CAGCCGCTGT CGTCCGCGGC AACGGCCAGC ACCTTGTCCG AAGAGATCAA CTCGGAGAAG
GCCGGCGGCA TGGCCATGCC GGGCCTGAAT GCCACCATCG AATCGCTGGA CCGGGTGCGC
GTCGACTCTG GCGGCCAGCG GCTCACCACC AACCAGGGCG TGCCCATCGC GGACAACCAG
AATTCGCTCA AGGCCGGCCT GCGCGGCCCC GCGCTGCTCG AAGACTTCAT CCTGCGCGAG
AAGATCACCC ACTTCGACCA CGAGCGCATT CCCGAGCGCA TCGTGCATGC GCGCGGTTCG
GGCGCCCACG GCTACTTCGA ATGCTACGAA GGCATCCCGC AGTTCACCAA GGCGGCGCCG
CTGCGCGAAG GCGGAAAGAT CACGCCGGTG TTCGTGCGCT TTTCCACCGT GGCCGGCGAG
CGCGGCTCCA AGGACACGGC GCGCGACGTG CGCGGCTTTG CCGTCAAGTT CTACACGGAC
GAAGGCAACT GGGACCTGGT GGGCAACAAC ATGCCCGTGT TCTTCATCCA GGACGCCATG
AAGTTTCCCG ACCTGGTCCA CGCCGTGAAG CCGGAGCCGC ATCACCAGAT GCCGCAGGCC
GCGAGCGCGC ACGACACCTT CTGGGACTTC GTCTCGCTCA TGCCCGAGTC GACCCACATG
CTGATGTGGC ACATGTCCGA TCGCGCCATT CCGCGCAGCT ACCGCATGAT GCAGGGCTTT
GGCGTGCACA CCTTCCGGCT CGTGAACGAG GCCGGCGATT CGGTGTTCTG CAAGTTCCAC
TGGTCGCCGG TGCTCGGAAC GCATTCACTG ATGTGGGACG AGGCCGTGAA GATCTCGGGC
GCCGACCCCG ACTTCCACCG CCGCGACCTG TGGGAAGCCA TCGAGGCCGG GGAGTTTCCG
GAATGGGAAC TCGGCCTGCA GATCTTCACC GAGGAAGAGG CCGAGGCCTT CAGCTTCGAC
GTGCTCGACG CCACCAAGAT CGTGCCCGAG GAACTGGTGC CGCTCACGCC CGTGGGGCGC
CTGGTGCTCA ACCGCAATCC CGACAATTTT TTTGCCGAGA CCGAGCAGGT GGCCTTCTGC
GCCGCGCACG TGGTGCCGGG CATCGACTTC ACCAACGACC CGCTGCTGGC CGGGCGCATC
CACTCCTACG TCGACACGCA GATCACGCGC CTGGGCGGGC CGAACTTCCA TGAGCTGCCG
ATCAACGCGC CGATGGCGCA GGTGCACAAC AACCAGCGCG ACGGCATGCA CCGCCAGGCC
ATCCACCGCG GCCGTGCGGC CTACGAGCCC AACTCGCTGG GCGGCGGCTG TCCGTTCCAG
GCCGGGGCTT CGGCCGGCTT CATGACTTTT CCGCAGCGCG CGGAGCAGGA CAAGGTGCGC
GGCAAGCCCG AGAAGTTTGC CGACCACTAC ACGCAGGCCA CGCTCTTCTT CGAAAGCCAG
ACGCCCACCG AGCAGGCCCA CATCGCGGCG GCGTTCCGCT TCGAGCTCTC CAAGTGCACC
GTGCCTGCCG TGCGCGAGCG CATGGTGGCG AGCCTCGTCA ATGCATCGCC GCTGCTCGCG
CAGCAGGTGG CCGACGGGCT CGGCATTCCG GTGCCGCCTG CGCTGCCTCG CGCACTTGCG
CAGCCTGTAA ATCCGGAGGT CACGCATTCG CACGCACTGT CGCTCACGGC GCGGCCCGGC
GATGGGTCCG TGCGCACGCG CAAGGTGGCG CTGCTGGTGG CGGACGGCGT GCAGGGCGAG
CAGATCGCCG CCATCCAGGC GGCGCTGCTG GCCGAAGGCG CCGTCGGCCG CCTGGTGGGA
CCGCGTATCG GACCGTTCCG CACGGCCGAG GGCGAGACGA TGGAAGCCGA CGCTTCGATG
GAAAACGAAC CCGGCTTCCT GTTCGATGCG CTGGTGCTGC CCGATGGCGC CGAAGGCGTG
GAGCTTCTCT CCGCCCATGC CTATACCGAG CAGTTCATCA AGGACCAGTA CCAGCACGGC
AAGACCATTC TCGCGCTCGG AGCCTCGGCC ACGCTGCTGG CCGAGGCGAA GATTCCGGAG
ACCCTGCCGT CGGGCGACGC GGACCCGGGC GTGCTGCGCG GCACGGCGGA GAATTTCGAA
TCCACCATCG AGGCCTTCGT CGCGGCTCTC GCCAGGCACC GGCATCCGGC GCGCGAGATC
GGGGCGCTGG TGGTGGACGC CGGCTAG
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| Protein sequence | MPPSRTPSPP ESGSAATSAA AAARNTDSGA AHLPGGPPPD PPSQKAAHAQ ALAAGMPFNA
NKPLEHGMDN ALRPPAGQTV QPLSSAATAS TLSEEINSEK AGGMAMPGLN ATIESLDRVR
VDSGGQRLTT NQGVPIADNQ NSLKAGLRGP ALLEDFILRE KITHFDHERI PERIVHARGS
GAHGYFECYE GIPQFTKAAP LREGGKITPV FVRFSTVAGE RGSKDTARDV RGFAVKFYTD
EGNWDLVGNN MPVFFIQDAM KFPDLVHAVK PEPHHQMPQA ASAHDTFWDF VSLMPESTHM
LMWHMSDRAI PRSYRMMQGF GVHTFRLVNE AGDSVFCKFH WSPVLGTHSL MWDEAVKISG
ADPDFHRRDL WEAIEAGEFP EWELGLQIFT EEEAEAFSFD VLDATKIVPE ELVPLTPVGR
LVLNRNPDNF FAETEQVAFC AAHVVPGIDF TNDPLLAGRI HSYVDTQITR LGGPNFHELP
INAPMAQVHN NQRDGMHRQA IHRGRAAYEP NSLGGGCPFQ AGASAGFMTF PQRAEQDKVR
GKPEKFADHY TQATLFFESQ TPTEQAHIAA AFRFELSKCT VPAVRERMVA SLVNASPLLA
QQVADGLGIP VPPALPRALA QPVNPEVTHS HALSLTARPG DGSVRTRKVA LLVADGVQGE
QIAAIQAALL AEGAVGRLVG PRIGPFRTAE GETMEADASM ENEPGFLFDA LVLPDGAEGV
ELLSAHAYTE QFIKDQYQHG KTILALGASA TLLAEAKIPE TLPSGDADPG VLRGTAENFE
STIEAFVAAL ARHRHPAREI GALVVDAG
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