Gene Vapar_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1997 
Symbol 
ID7969790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2143853 
End bp2144284 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content60% 
IMG OID644792595 
Producthypothetical protein 
Protein accessionYP_002943909 
Protein GI239814999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0312048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAC TGTTATTGAT GTGTGCCGCA GCCTCCTGCA TGGCAGTGGG CCAGGTGCAT 
GCGCAAGTGA ACACGCCTCC CGCGGCGGCC ACCGATCCGG CCATGGCCGA ATACAAGGCT
GCGCGCGACA AGATCTCGGC CGACTACAAG GCCGACAAGG CGGCTTGCGA TGCCATGAAG
GACAACGCCA AGGACGTCTG CATCGAAGAA GCCAAGGGCA AGGAAAAGAT TGCCAAGGCC
GAACTCGAGC AGAAGCAGAA GCCCAGCGAC AGCAACGCAC GCAAGGTGGC CGAAGCCAAG
GTGGAAGCGG CCTATGCGAT CGCCAAGGAA AAGTGCGACG ACCAGAAGGG CGACGCCAAG
AGCGCTTGCG TGAAGGAAGC CAAGGCCACC GAGGCCAAGG GCAAGGCCGA CATCAAGGCG
ATGAAGAAGT AG
 
Protein sequence
MKKLLLMCAA ASCMAVGQVH AQVNTPPAAA TDPAMAEYKA ARDKISADYK ADKAACDAMK 
DNAKDVCIEE AKGKEKIAKA ELEQKQKPSD SNARKVAEAK VEAAYAIAKE KCDDQKGDAK
SACVKEAKAT EAKGKADIKA MKK