| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1995 |
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| Symbol | |
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| ID | 7969788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2142659 |
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| End bp | 2143540 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792593 |
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| Product | cytochrome c class I |
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| Protein accession | YP_002943907 |
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| Protein GI | 239814997 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2857] Cytochrome c1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0213556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCGA TGGGTGCACC CAAGACCGCT CTACTCACCG TCGCCGCGCT GGGCATCGCG
GGCGTGGCGG CGGGCGCGCT GGTGGTGTAT GGCGGCCTCT ACGACGTGGC GGCCACGCAG
CAGCATTTCC AGCCGGTCTA TTCGATGCTG GAAACCGCCA TGCGCCAGTC GGTGAAGATG
CGCGCGCGCA ACATCGAGCC GCCGCGGCTC GACGACGAGC GGCTGGTGAT GCGCGGCGCG
GCCTGTTTTC GCGACAAGTG CGTGCAATGC CATGGTGCGC CGGGCGTCGC GCAGGGCGAC
ATCGGAAAGA GCATGCAGCC GCTGCCGGGG CCGCTGGTGG ATGCGCGGCA CCACTGGAAG
CCGCGCGAAC TGTACTGGCT GACCAAGCAC GGCATCCGCA TGAGCGGCAT GCCGGCCTGG
GAGTTCAGGT TGTCCGAGGA AGACCTGTGG TCGGTGGTGG CGTTCATGGC GCGCCTGCCC
GAGCTCACGC CGCAGCAGTA TGCCGAAGCC ACGCGCGTGG AGCCCACCGG CGCACAGGGC
GCACAGGGCG CACCGGCGCG GCCGGCATGC GGGCCGGCAG ATGGCGCCGC GCCGCTGCGG
GCGGCCGATG CGCAGCGCGG CGCGCGGGCG CTGCCCCAGT ACGCATGCAG CGCCTGCCAC
ACGATCCCCG GCATCACGAG CTCGTCGCCC AACGTGGGGC CGCCGCTTGC GGGCATGGGC
GGCCGTTCGC TGATTGCGGG AAAGCTCGCC AACACGCCGG ACAACATGGT GCGCTGGCTG
CGCCACACGC ACGAGGTCGA TCCGCTCACG GCCATGCCGC AGATGAGCGT GTCCGAGCAG
GACGCGCGGG ATATCGCCGC CTATCTGGCG GCGCTGCGCT GA
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| Protein sequence | MLPMGAPKTA LLTVAALGIA GVAAGALVVY GGLYDVAATQ QHFQPVYSML ETAMRQSVKM
RARNIEPPRL DDERLVMRGA ACFRDKCVQC HGAPGVAQGD IGKSMQPLPG PLVDARHHWK
PRELYWLTKH GIRMSGMPAW EFRLSEEDLW SVVAFMARLP ELTPQQYAEA TRVEPTGAQG
AQGAPARPAC GPADGAAPLR AADAQRGARA LPQYACSACH TIPGITSSSP NVGPPLAGMG
GRSLIAGKLA NTPDNMVRWL RHTHEVDPLT AMPQMSVSEQ DARDIAAYLA ALR
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