| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1986 |
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| Symbol | |
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| ID | 7969779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2134138 |
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| End bp | 2134443 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644792584 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002943898 |
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| Protein GI | 239814988 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0615547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCCGAG TAGTTGCAAA CAAGCCCCAG CCACTGGACT CTGTGTCCAG CAAAGAGCTG
GAGCGTCTGC AACAAGCATT TGGCGAGCAT CTGCGCGCCT TACGGCACGA CCGCCTCATC
ACGATCGAGC AACTTGCGGA GTTGGCCGGC TTGCACCCCA ATTACGTTGG TTCTGTTGAA
CGAGGCGAGC GCAACTTGTC GCTCTTCAAC ATTTGGAGGC TGGCCGGCGG CCTGGAGGTC
TCGGTCTCGC AACTTGTGGA AACGCTGCCC GCGCGGGTGG TCAAGCGTGG CCGCCGAGCC
AGCTAA
|
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| Protein sequence | MPRVVANKPQ PLDSVSSKEL ERLQQAFGEH LRALRHDRLI TIEQLAELAG LHPNYVGSVE
RGERNLSLFN IWRLAGGLEV SVSQLVETLP ARVVKRGRRA S
|
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