| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1985 |
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| Symbol | |
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| ID | 7969778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2133303 |
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| End bp | 2133875 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792583 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002943897 |
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| Protein GI | 239814987 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.127285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCAGCC TCTCCGCAGC CCGCATCGGC GCGCAGGTGC GGGCGCTGCG CATGGCGGCC
GAGGTGTCTG GCGGCGAACT GGCCAAGACC TCGGGGATTT CTGCGTCGAT GCTTTCTCGC
ATCGAGCGCG GGCTGGTCTC GCCTTCGGTG GAGACACTGG AGCGCCTGGC GCAGGGGCTG
CACGTGCCGA CCTCACGCTT CTTCAGTGAC CAGGCGCGGC GCACTGACTT TTGCCATGTG
CGTGCAGGAC ATGGTGTCTT GGTCGATCGC ATCGGCGCGG TGGCGGACTA CCGCTACGAG
CTGCTGGGCC ACCTGCTGTC GGGTAACCTG TTCGTCGAGC CCTACCTGGT CACATTGCTG
CCCGGCGCCG ATCCCTACGT GACCTTCCAG CACCCCGGCT TGAAGTTCCT GTACTTCCTC
TCCGGGGGGG TCACCTACCG CTATGGCGGC AAGTCAGTCG GGGTGAGGGC TGGGGACTCG
CTGCTGTTCG AAGCGACCGC ACTGCATGGG ATCGAGGCCA TTCACACTCA GCCGGTCTCT
TACCTGTCCG TAGTGTTCAC GCTGCGAGAG TAG
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| Protein sequence | MRSLSAARIG AQVRALRMAA EVSGGELAKT SGISASMLSR IERGLVSPSV ETLERLAQGL
HVPTSRFFSD QARRTDFCHV RAGHGVLVDR IGAVADYRYE LLGHLLSGNL FVEPYLVTLL
PGADPYVTFQ HPGLKFLYFL SGGVTYRYGG KSVGVRAGDS LLFEATALHG IEAIHTQPVS
YLSVVFTLRE
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