Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1963 |
Symbol | |
ID | 7969756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2099300 |
End bp | 2100388 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644792561 |
Product | arsenical-resistance protein |
Protein accession | YP_002943875 |
Protein GI | 239814965 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0798] Arsenite efflux pump ACR3 and related permeases |
TIGRFAM ID | [TIGR00832] arsenical-resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.180704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGAATC CCGCCGCCAC TCCCGCCGCT GCTGCACCGC CCGCAGCGCC GCCCGCCATC GGCTTCTTCG AGCGCTACCT CACGGTGTGG GTCGCGCTGT GCATCGTGGC GGGCATTGCG CTGGGCCAGT GGCTGCCGGG CGTGTTCCGC GGCATTGCGT TGCTCGAGGT GGCCAAGGTC AACGTGCCGG TGGGCGTGCT GATCTGGGTG ATGATCATCC CGATGCTGCT GAAGATCGAC TTCGCGGCGC TCGGGCAGGT GAAGGCGCAT TGGCGCGGCA TCGGCGTCAC GCTCTTCATC AACTGGGCCG TGAAGCCGTT CTCGATGGCG CTGCTGGGCT GGATCTTCAT CCGCCACGTG TTCGCGCCGC TGCTTCCGCC CACGCAACTC GACAGCTACA TCGCGGGCCT GATCCTCTTG GCAGCGGCGC CCTGCACGGC GATGGTGTTC GTGTGGAGCC AGCTGTGCAG GGGCGACCCG TACTTCACGC TGTCGCAGGT GGCGCTCAAC GACGCGATCA TGGTGGTGGC CTTCGCGCCG GTGGTCGCGC TCTTGCTCGG GCTGTCGTCG ATCACGGTGC CCTGGGACAC GCTCTTGACC TCGGTGGGCC TGTACATCGT GGTGCCGGTG ATCATTGCGC AGCTGCTGCG CAAGCACTTG CTCAAGAAGG GCACGGCCCG CTTCCAGGCG GTGGCGGCGC GGCTCGGGCC CTGGTCGATC TCGGCGCTGC TGCTCACGCT GGTGCTGCTG TTCGCCTTCC AGGGCGAAGC CATCATCCGG CAGCCGCTGG TGATTGCGCT GCTCGCCGTG CCGATCCTGA TCCAGGTGTT CGTGAATTCG GGCCTGGCCT ATGTGCTCAA CCGCAGGCTG GGCGTGGCGC ATTGCGTGGC CGGCCCGTCG GCGCTGATCG GCGCGAGCAA TTTCTTCGAG CTTGCGGTGG CCACGGCCAT CAGCCTGTTC GGCTTCCAGT CGGGCGCCGC GCTGGCCACG GTGGTGGGCG TGCTGATCGA GGTGCCGGTG ATGCTGCTGG TGGTTTCGGT GGTCAACCGG TCGCAGGGCT GGTACGAAAA AGGCGTGCGG GCCGCCTGA
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Protein sequence | MLNPAATPAA AAPPAAPPAI GFFERYLTVW VALCIVAGIA LGQWLPGVFR GIALLEVAKV NVPVGVLIWV MIIPMLLKID FAALGQVKAH WRGIGVTLFI NWAVKPFSMA LLGWIFIRHV FAPLLPPTQL DSYIAGLILL AAAPCTAMVF VWSQLCRGDP YFTLSQVALN DAIMVVAFAP VVALLLGLSS ITVPWDTLLT SVGLYIVVPV IIAQLLRKHL LKKGTARFQA VAARLGPWSI SALLLTLVLL FAFQGEAIIR QPLVIALLAV PILIQVFVNS GLAYVLNRRL GVAHCVAGPS ALIGASNFFE LAVATAISLF GFQSGAALAT VVGVLIEVPV MLLVVSVVNR SQGWYEKGVR AA
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