Gene Vapar_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1963 
Symbol 
ID7969756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2099300 
End bp2100388 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content67% 
IMG OID644792561 
Productarsenical-resistance protein 
Protein accessionYP_002943875 
Protein GI239814965 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0798] Arsenite efflux pump ACR3 and related permeases 
TIGRFAM ID[TIGR00832] arsenical-resistance protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.180704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGAATC CCGCCGCCAC TCCCGCCGCT GCTGCACCGC CCGCAGCGCC GCCCGCCATC 
GGCTTCTTCG AGCGCTACCT CACGGTGTGG GTCGCGCTGT GCATCGTGGC GGGCATTGCG
CTGGGCCAGT GGCTGCCGGG CGTGTTCCGC GGCATTGCGT TGCTCGAGGT GGCCAAGGTC
AACGTGCCGG TGGGCGTGCT GATCTGGGTG ATGATCATCC CGATGCTGCT GAAGATCGAC
TTCGCGGCGC TCGGGCAGGT GAAGGCGCAT TGGCGCGGCA TCGGCGTCAC GCTCTTCATC
AACTGGGCCG TGAAGCCGTT CTCGATGGCG CTGCTGGGCT GGATCTTCAT CCGCCACGTG
TTCGCGCCGC TGCTTCCGCC CACGCAACTC GACAGCTACA TCGCGGGCCT GATCCTCTTG
GCAGCGGCGC CCTGCACGGC GATGGTGTTC GTGTGGAGCC AGCTGTGCAG GGGCGACCCG
TACTTCACGC TGTCGCAGGT GGCGCTCAAC GACGCGATCA TGGTGGTGGC CTTCGCGCCG
GTGGTCGCGC TCTTGCTCGG GCTGTCGTCG ATCACGGTGC CCTGGGACAC GCTCTTGACC
TCGGTGGGCC TGTACATCGT GGTGCCGGTG ATCATTGCGC AGCTGCTGCG CAAGCACTTG
CTCAAGAAGG GCACGGCCCG CTTCCAGGCG GTGGCGGCGC GGCTCGGGCC CTGGTCGATC
TCGGCGCTGC TGCTCACGCT GGTGCTGCTG TTCGCCTTCC AGGGCGAAGC CATCATCCGG
CAGCCGCTGG TGATTGCGCT GCTCGCCGTG CCGATCCTGA TCCAGGTGTT CGTGAATTCG
GGCCTGGCCT ATGTGCTCAA CCGCAGGCTG GGCGTGGCGC ATTGCGTGGC CGGCCCGTCG
GCGCTGATCG GCGCGAGCAA TTTCTTCGAG CTTGCGGTGG CCACGGCCAT CAGCCTGTTC
GGCTTCCAGT CGGGCGCCGC GCTGGCCACG GTGGTGGGCG TGCTGATCGA GGTGCCGGTG
ATGCTGCTGG TGGTTTCGGT GGTCAACCGG TCGCAGGGCT GGTACGAAAA AGGCGTGCGG
GCCGCCTGA
 
Protein sequence
MLNPAATPAA AAPPAAPPAI GFFERYLTVW VALCIVAGIA LGQWLPGVFR GIALLEVAKV 
NVPVGVLIWV MIIPMLLKID FAALGQVKAH WRGIGVTLFI NWAVKPFSMA LLGWIFIRHV
FAPLLPPTQL DSYIAGLILL AAAPCTAMVF VWSQLCRGDP YFTLSQVALN DAIMVVAFAP
VVALLLGLSS ITVPWDTLLT SVGLYIVVPV IIAQLLRKHL LKKGTARFQA VAARLGPWSI
SALLLTLVLL FAFQGEAIIR QPLVIALLAV PILIQVFVNS GLAYVLNRRL GVAHCVAGPS
ALIGASNFFE LAVATAISLF GFQSGAALAT VVGVLIEVPV MLLVVSVVNR SQGWYEKGVR
AA