Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1952 |
Symbol | |
ID | 7969745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2091489 |
End bp | 2093012 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644792551 |
Product | Galactarate dehydratase |
Protein accession | YP_002943865 |
Protein GI | 239814955 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2721] Altronate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACA GCCCCCTGCT TCGCCTGCAC CCGCACGACA ACGTGCTGGT TGCCAAGACG CCCATCGCCC TTGGCGAAAC GATTGCCGAG TTCGGCGTGC GGGCGCGCGC GCAGATTCCC GCGGGGCACA AGATTGCGTC GCGCGCCATT GCGGCCGGCG AGCAGGTGAA GAAGTACGAC ACCGTCATTG GCGTGGCCTC GCGCGATCTG GAGGCGGGCG ACTACGCGCA CAGCCACAAC CTCACGCTGG TCGACTCCTA CCGCGACCCG GCCTTCTGCC AGGACCTGCG GCCGGTGGCC TACGTGCCCG AGGCCGAGCG CGCCACCTTC ATGGGCTTTG TGCGGGCCGA CTGCCGCGTG GGCACGCGCA ACTTCATCGG CATCTTGTCG TCGGTCAACT GCTCGGCCAC TGTCATCAAG CGCATCGCGG CGCACTTCAC GCCCGAGCGC CTGGCGGCCT TTCCCAACGT GGACGGCGTG GCCGCCTTCG CGCAGACCAG CGGCTGCGGC ATGTCGTCGC CGAGCGAGCA TTTCGACGTG CTGCGCCGCA CCTTGGCCGG CTATGCGCGC CATCCCAACC TGGCCGGCGT GCTGATCGTG GGCCTGGGCT GCGAGCGCAA CCAGGTCGAT GCGCTGGTCG ACTCGCAGGG CCTGCAGCAG GGCCGCCTGA TGCGCACGAT GGTCATGCAG GAGGTGGGCG GCACGCGCCA GACCATCGAG GCCGGCATCC GCGCCGTGGA AGAAATGCTG CCCGAGGCCA ACGCGGCCGA GCGCACCCGC GTGGGCGCCA ACCACCTGAA GATCGGCCTG GAGTGCGGCG GCTCCGACGG CTTCTCGGGC ATCACGGCCA ACCCGGCATT GGGCGCCGCC ATGGACGTGC TGGTGCGCCA CGGCGGCACC GCCATTCTTT CGGAAACGCC GGAGATCCAC GGCGTCGAAT TCATGCTCAC GCGGCGCGCC GCCACGCCCG AGGTCGGCCA GAAGCTGCTC GACCGGCTGG CCTGGTGGGA GCGCTACACG GCCGGCCAGA ACGCGCAGTT CAACGGCGTG GTGGGGCACG GCAACCAGGC CGGCGGGCTC GCCAACATCT TCGAGAAATC GCTGGGCTCG GCCATGAAGG GCGGCACCAC GCCGCTGCAG GCCGTGTACG AATATGCGGA GCCGATCGAC CAGGCCGGAT TCGTCTTCAT GGATTCGCCG GGCTACGACC CGGTGGCCGT GACCGGGCAG ATCGCGAGCG GCGCGCAGCT GATCTGCTTC ACCACCGGGC GCGGCTCGAT GTTCGGCAGC AAGCCCGCAC CCACCATCAA GCTGGCCAGC AACACGCCGA TGTTCAAGCG CCTCGAGGAG GACATGGACA TCAACTGCGG CGTGGTGCTC GACGGCGAAC TCTCGGTGCC CGAGCTCGGC CAGCAGATCT TCGAGCAGAT CCTGCGCCAT GCCTCCGGCG AGCGGACACG CAGCGAAGCG CTGGGCCTGG GCGACCATGA ATTCGTGCCA TGGCACCTGG GCATCGTCAG CTGA
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Protein sequence | MTDSPLLRLH PHDNVLVAKT PIALGETIAE FGVRARAQIP AGHKIASRAI AAGEQVKKYD TVIGVASRDL EAGDYAHSHN LTLVDSYRDP AFCQDLRPVA YVPEAERATF MGFVRADCRV GTRNFIGILS SVNCSATVIK RIAAHFTPER LAAFPNVDGV AAFAQTSGCG MSSPSEHFDV LRRTLAGYAR HPNLAGVLIV GLGCERNQVD ALVDSQGLQQ GRLMRTMVMQ EVGGTRQTIE AGIRAVEEML PEANAAERTR VGANHLKIGL ECGGSDGFSG ITANPALGAA MDVLVRHGGT AILSETPEIH GVEFMLTRRA ATPEVGQKLL DRLAWWERYT AGQNAQFNGV VGHGNQAGGL ANIFEKSLGS AMKGGTTPLQ AVYEYAEPID QAGFVFMDSP GYDPVAVTGQ IASGAQLICF TTGRGSMFGS KPAPTIKLAS NTPMFKRLEE DMDINCGVVL DGELSVPELG QQIFEQILRH ASGERTRSEA LGLGDHEFVP WHLGIVS
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