| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1951 |
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| Symbol | |
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| ID | 7969744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2089997 |
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| End bp | 2091466 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792550 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_002943864 |
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| Protein GI | 239814954 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCTCA ATCTCACCCG CCCCGACCTG CAGCGCACCG CCAACTTCAT CGGCGGCGAA
TGGTGCGCCG CCGCCGGCCG CACGCTCGAC GTGACCGACC CCGCCACCGG TGCGCTCATC
GCCCAGGTGC CCGATTCCGG CGCCGATGCC GCGCGTGCCG CCGCCGATGC CGCGCACGCC
GCCTTCCCCG CCTGGCGCCG CACGCCGGCC AAGCAGCGCG CGCAGATCCT CAAGCGCTGG
AACGACCTGG TGCTCGCGCA CCAGGAAGAC CTGGGCCGCC TGATCTCGCG CGAACAGGGC
AAGCCGCTGG CCGAAGGCAT CGGCGAGGTC GCCTACGCCG CGAGCTACAT CGAGTGGTTT
GCCGAAGAGG CCACGCGCGC CAACGGCGAC GTGATTCCCG CGCCTGTTCC GGGCCGGCGC
ATGTTCGCCA TCAAGGAGCC GGTCGGTGTG GTCGCCGCGA TCACGCCGTG GAATTTTCCG
GCCGCGATGA TCGCGCGCAA GATCGCGCCG GCGCTGGCCG CGGGCTGCAC CGTGGTTTGC
AAGCCGGCCG AGGACACGCC GCTCACCTCG CTCGCGCTGG TGGCGCTGGC CGCGCAGGCC
GGCGTGCCCG CGGGCGTGCT CAACATCGTG ACGGCTTCGC GCGAGCGCAC GCCCGAGGTG
GTCGACGCGT GGCTGAGCGA CGCCCGCGTG CGCAAGATCA CCTTCACCGG GTCGACGCCG
GTCGGCAAGC ACCTGGCGCG CCGCTCGGCC GACACGCTCA AGAAACTCTC GCTCGAGCTG
GGCGGCAATG CGCCCTTCAT CGTGTTCGAG GATGCCGACC TTCACGCCGC GGTCGACGGC
CTGATGGCCG CCAAGTTCCG CAACGGCGGC CAGACCTGCG TCTGCCCGAA CCGCGTGTTC
GTGCACGAGG CCGTGCATGA CGAGTTTGCG GGGCTGCTCG CGGCCCGTGT CGGATCGCTG
CGCGTCGGTC CGGCCAGCGA CCCCGCTTCG CAGATCGGCC CGATGATCAA TGCGCGCGCC
ATCGAGAAGA TCGAGCGCCA TGTGCAGGAC GCCGTTTCGC GCGGCGCACG CGTGCTCGCG
GGCGGCACGC GGCTGCCCGC GCTCGGGCCG AACTACTTCG CGCCCACCGT GCTTATCAAC
GCCGACGCCA CCATGGCCTG CGCCTGCGAA GAAACCTTCG GCCCGGTCGT TCCACTGACG
CGCTTCGCGG ATGAAGCCGA GGTGGTGGCC CGGGCCAACG ACACGCCCTT CGGCCTGGCC
GCGTATTTCT ACTCGCGCGA CGTGCGCCGC ATCTGGCGCG TGGCGGACGC GCTCGAAGCC
GGCATCGTCG GCATCAACGA AGGCGCACTG GCCGCGGAAG CCGCGCCCTT CGGCGGCGTG
AAAGATTCAG GCTACGGCCG CGAAGGCTCG GTCCACGGCC TGGACGACTA CCTGCATACC
AAATACGTCT GCCAGGGCCA GCTCGACTGA
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| Protein sequence | MPLNLTRPDL QRTANFIGGE WCAAAGRTLD VTDPATGALI AQVPDSGADA ARAAADAAHA
AFPAWRRTPA KQRAQILKRW NDLVLAHQED LGRLISREQG KPLAEGIGEV AYAASYIEWF
AEEATRANGD VIPAPVPGRR MFAIKEPVGV VAAITPWNFP AAMIARKIAP ALAAGCTVVC
KPAEDTPLTS LALVALAAQA GVPAGVLNIV TASRERTPEV VDAWLSDARV RKITFTGSTP
VGKHLARRSA DTLKKLSLEL GGNAPFIVFE DADLHAAVDG LMAAKFRNGG QTCVCPNRVF
VHEAVHDEFA GLLAARVGSL RVGPASDPAS QIGPMINARA IEKIERHVQD AVSRGARVLA
GGTRLPALGP NYFAPTVLIN ADATMACACE ETFGPVVPLT RFADEAEVVA RANDTPFGLA
AYFYSRDVRR IWRVADALEA GIVGINEGAL AAEAAPFGGV KDSGYGREGS VHGLDDYLHT
KYVCQGQLD
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