Gene Vapar_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1946 
Symbol 
ID7971125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp2084437 
End bp2084976 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content66% 
IMG OID644792545 
Producthypothetical protein 
Protein accessionYP_002943859 
Protein GI239814949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.321745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGAT TCCTCGGCGA GATTCGCCAG CTGGGCTATG TCGTGCACGA CATCGAGGCC 
GCCATGGACT ACTGGAGCAC CACGCTGGGC GTGGGCCCGT GGTTCTACAA CCCCAAGGTG 
CCGATCAAGA ACTACCGCTA CAACGGCCAG GCGCACGAGC CCCACAACTC GGTGGCGCTG 
GCCAACTCGG GCTATGTGCA GGTCGAGCTG ATCCAGACGC GCAACGACGT GCCCTCGATG 
TACCGCGACT TCCTGCAGGC CGGCCGCACC GGGCTGCAGC ACGTTGCCTA CTGGACCGCC 
GACTACGACG CCGACCTGGC ACGCCTCACC GCGCAGGGCT TCAAGCCCGT GATGAGCGGC 
GAGGTGGGCG AGCGCGGCCG CTTCATCTAC TTCGACACCG AATACCACCC GGGCACGGTG 
ATCGAGCTGT CCGAAGTGGC AGGGCCCAAG GGCAAGATGT TCGACCTGAT CCGCAGCGCC 
TCCGAAGGCT GGGACGGCAG CGAGCCGGTG CGGCCCTTTC CCGACCTGAG CAGGCTGTGA
 
Protein sequence
MSRFLGEIRQ LGYVVHDIEA AMDYWSTTLG VGPWFYNPKV PIKNYRYNGQ AHEPHNSVAL 
ANSGYVQVEL IQTRNDVPSM YRDFLQAGRT GLQHVAYWTA DYDADLARLT AQGFKPVMSG 
EVGERGRFIY FDTEYHPGTV IELSEVAGPK GKMFDLIRSA SEGWDGSEPV RPFPDLSRL