| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1945 |
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| Symbol | |
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| ID | 7971124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2083169 |
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| End bp | 2084440 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644792544 |
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| Product | Ribulose-bisphosphate carboxylase |
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| Protein accession | YP_002943858 |
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| Protein GI | 239814948 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.336717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGTGG CCGAACGCAT CCGCGCGCGC TACCTCATCG AGACGCCGCT GGACCCGGCC
GCCGTGGCCG AGGTGATGGC CGGCGAACAA TCGTGCGGCA CCTTCACGCG CGTCGAGGGC
GAGACCGACG CGCTGCGCGA ACGTGCGCGC GCCACGGTCG AGGCGATCAC CGAGCTTGCA
CCGGCCGAGG CGCCGAGCCT GCCCAACGCC ATGCTGGAGC GCAAAGGCAC GCGCGGCCCA
TGGCGGCGTG CGCACATCGA CATCTCGTTT CCGGTGGCAA ACATCGGCGC CAACCTGCCG
ACGCTCGCGG CCACCGTGTC GGGCAACCTC TACGACCTGG GCGAAGTCAC GGGCCTGCGG
CTCGAATCGC TGCAGCTGCC CGCCGCGTAC CGCGCGCAGT TCGAAATGCC CCGTGCCGGC
ATCGCGGGCA CGCGGCGCAT CACCGGCGTG GCAAGCGGCG CGCTGGTCGG CACCATCATC
AAGCCCAACG TGGGACTGTC CGCCGGCGAG ACCGCCGAGC TGGTCGCCAG GCTCTGCGCC
GCGGGCGTCG ACTTCATCAA GGACGACGAG GTCTGCGCCA ACCCCGCGCA TGCCCCGCTC
GCCGAGCGCG TGCCCGCCGT GATGGCCGTG GTGCGCGCGC ACCAGCAGCG CACCGGCAAG
CATGTGATGG TGGCCTTCAA CATCACCGAT GAAACCGATG CGATGAAGCG GCATGCCGAC
CTGGTCGAGC GCGAAGGCGG CTCGTGCGTG ATGGCCAGCC TCAACTGGTG CGGCCATTCG
GGCATGCAGA CGCTGCGCCG CCACACCGGC CTGGCGCTGC ACGGCCACCG CAACGGCTAC
GGCGCGCTGT CGCGCCATCC GCTGCTGGGT ATTTCGTTCC AGGCCTATCA AACGCTCTGG
CGGCTCGCGG GCGTCGACCA CATGCACGTG CACGGCCTGC AGGGCAAGTT CTCGCAGCCC
GACAGCGAAG TCATCGAATC GGCACGCGAC TGCTTCACGC CTCTCACCGA TGCCGCGGAC
GACCGCGTGA TGCCGGCCTT CTCGTCCGGC CAGTGGGCCG GCACCGTGCC CGCCACCTGG
GCCGCCATCT GCAGCGACGA CCTGCTCTTC ATGGCCGGCG GCGGCATCCT CGCGCATCCC
GATGGCGCGG CGGCCGGTGT CACCAGCATC CGCCAGGCCT GGTCGGCCGC GCGCGCCGGC
ACCGCGCTGC AGGAAGCCGC CCGCGGCGCG CCCGAGCTGG CGCGCGCGCT GGCCTTCTTC
GGCAAGCCGT GA
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| Protein sequence | MTVAERIRAR YLIETPLDPA AVAEVMAGEQ SCGTFTRVEG ETDALRERAR ATVEAITELA
PAEAPSLPNA MLERKGTRGP WRRAHIDISF PVANIGANLP TLAATVSGNL YDLGEVTGLR
LESLQLPAAY RAQFEMPRAG IAGTRRITGV ASGALVGTII KPNVGLSAGE TAELVARLCA
AGVDFIKDDE VCANPAHAPL AERVPAVMAV VRAHQQRTGK HVMVAFNITD ETDAMKRHAD
LVEREGGSCV MASLNWCGHS GMQTLRRHTG LALHGHRNGY GALSRHPLLG ISFQAYQTLW
RLAGVDHMHV HGLQGKFSQP DSEVIESARD CFTPLTDAAD DRVMPAFSSG QWAGTVPATW
AAICSDDLLF MAGGGILAHP DGAAAGVTSI RQAWSAARAG TALQEAARGA PELARALAFF
GKP
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