| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1941 |
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| Symbol | |
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| ID | 7971120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2077020 |
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| End bp | 2077454 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644792540 |
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| Product | protein tyrosine phosphatase |
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| Protein accession | YP_002943854 |
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| Protein GI | 239814944 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0394] Protein-tyrosine-phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAATCCG TTCTTGTCGT TTGCATCGGC AACATCTGCC GAAGCCCAAT GGCGCATGTC
CTGCTGGCCG ATGCGCTGCC GGAGATCACC GTTTCGTCAG CCGGCACGGG TGCATTGATA
GGCCACCCCG CAGACCCTAT CGCCCAAGAA TTGATGGCCG CGCGCGGCCT TGACCTGAGC
GCCCACCGCG CGCGCCAGAT CACCCAGCCC ATGTGTGTGC AGGCCGACCT GATCCTCACC
ATGGACGACG GGCAGCGCCG CCACATCGAA AACACCTACC CGCTCACGCG CGGCAGGGTC
TTTCGGCTTG CCGAAACCGC CAAGCTGAAT ATCCCCGACC CCTACCGCAT GGGCCAGGAA
GCCTTCGAGC ACGCACTTCA ACTCATCGAC GCCGGCGTCA AGACATGGGC CGAACGGATT
CGGCAATTCA AATGA
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| Protein sequence | MKSVLVVCIG NICRSPMAHV LLADALPEIT VSSAGTGALI GHPADPIAQE LMAARGLDLS
AHRARQITQP MCVQADLILT MDDGQRRHIE NTYPLTRGRV FRLAETAKLN IPDPYRMGQE
AFEHALQLID AGVKTWAERI RQFK
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