| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1929 |
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| Symbol | |
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| ID | 7971108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2062860 |
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| End bp | 2063948 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644792528 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_002943842 |
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| Protein GI | 239814932 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.423986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAT TCATCGACCT CAAAGCCCAG CAAGCGCGCA TCAAGGACCA GATCGATGCG
GCTATTCAGC GTGTGCTGGC ACATGGACAG TACATCCTCG GGCCCGAAGT CGCCGAGTTG
GAAGAGAAGC TGGCCGCCTA TACGGGCGCC AGGCATTGCA TTACCGTGGC CAATGGCACG
GACGCATTGC AGATTGCGCA AATGGCGCTC GGCATCGGGC CGGGCGATGA AGTCATTACC
CCGGGGTTTA CCTACATTGC TACCGCCGAA ACCGTAGCGC TGCTCGGCGC CAAGCCGGTG
TACGTGGACA TCGACCCGCG CACCTACAAC CTGGACCCGG CCCTGCTCGA GGCTGCGATC
ACTCCGCGGA CCAAGGCCAT TGTTCCGGTC AGCCTGTATG GCCAGTGTGC CGACTTCGAC
GCCATTAATG CCATTGCCGC ACGGCATGAA ATTCCCGTAA TCGAAGACGC GGCGCAGAGT
TTTGGGGCTA CTTACAAGGG GCGCAAGAGT TGCAATCTCA GCACCATTGC ATGTGCCAGT
TTCTTTCCTA GCAAGCCGTT GGGGTGCTAC GGCGATGGTG GGGCCATTTT CACCAACGAC
GATGAGTTAG CAAAGGTGAT GCGCCAGATT GCCCGGCATG GGCAAGATCG GCGATACCAC
CATATCCGGG TGGGTGTGAA TAGCCGGCTG GATACCTTGC AGGCTGCAAT CCTACTGACA
AAGCTAAAAA TACTTGATGA CGAAATAGCG AGCCGCCAGC GTGTGGCTGC GGAATACAGT
CGCTTATTGG ACGAGGTCGG TCTTGCCACC CCACCGTATA TCGAGCCGCA TAATCAAAGT
GCCTGGGCCC AATATACCGT ACGCGTAGGC GACCGTGAAG CGCTACAGGT CCGTATGAAG
GAGGCAGGGG TGCCGACCGC AGTGCATTAC CCCATTCCGT TGAATCTACA GCCAGCGGTG
GCGGATGAAC GGGCCAAATT GCCGCTTGGT GATGCGATCG CGCGAGAAGT CCTAAGCTTG
CCAATGCACC CGTACATGAA ACTGCAAGAG CAAGAAGGCA TCGCGCAGGT CTTGAGGTGG
AAGCTGTGA
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| Protein sequence | MIEFIDLKAQ QARIKDQIDA AIQRVLAHGQ YILGPEVAEL EEKLAAYTGA RHCITVANGT
DALQIAQMAL GIGPGDEVIT PGFTYIATAE TVALLGAKPV YVDIDPRTYN LDPALLEAAI
TPRTKAIVPV SLYGQCADFD AINAIAARHE IPVIEDAAQS FGATYKGRKS CNLSTIACAS
FFPSKPLGCY GDGGAIFTND DELAKVMRQI ARHGQDRRYH HIRVGVNSRL DTLQAAILLT
KLKILDDEIA SRQRVAAEYS RLLDEVGLAT PPYIEPHNQS AWAQYTVRVG DREALQVRMK
EAGVPTAVHY PIPLNLQPAV ADERAKLPLG DAIAREVLSL PMHPYMKLQE QEGIAQVLRW
KL
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