| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1927 |
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| Symbol | |
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| ID | 7971106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2061314 |
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| End bp | 2062261 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644792526 |
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| Product | oxidoreductase domain protein |
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| Protein accession | YP_002943840 |
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| Protein GI | 239814930 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.401942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAATT TTGCCCTCAT CGGCGCAGCT GGCTACATCG CTCCGCGCCA TATGCGAGCC
ATCAAGGACA CCGGCAACCA CCTGGCGGTG GCCTATGACA TCAACGACTC GGTCGGGATC
ATCGACAGCA TCTCTCCGCA GAGCGAATTC TTTACCGAGT TCGAGCGCTT TCAGGAACAT
GCCCAGCAGC TCAAGCGCAA TCCAGCGAGC GCGCTCGACT ATGTTGCGGT CTGCAGCCCC
AACTATCTGC ACCACGCCCA TATCGCTGCC GGGCTGCGCC TGGGCGCCGA CGTCATCTGC
GAAAAACCGC TGGTTCCCAC GCCGGAGCTT GTCGACGAAT TGGCGCTGGT GGAAAAGGAA
ACTGGCCGCA GGGTCCACAA CATCCTTCAG CTGCGCCACC ACGAAGCCAT CTTGAGGCTG
CGTGACAAGG TAGCCAAGGC GCCTTCGGAC ACCAAGTTTG ATGTGGAACT CACCTACATC
ACATCGCGCG GCAAGTGGTA TGCCGAAAGC TGGAAGGGCG ACAACCGCAA GTCCTTCGGC
GTTGCGACCA ATATTGGGGT GCATTTCTAC GACATGCTGC ACTTCATTTT CGGCAAGCTG
CAGCGCAACG TAGTGCATTA CAGCGGCGTT GCAAAGGCCG CCGGTTACCT TGAATACGAA
CGTGCGCGCG TGCGGTGGTT TCTCTCCATC GACGCTGACG ATCTTCCGGC CGATGTCAAA
GGCAAGAAGA CGACGTTCCG CAATATCGAC GTCAGCGGCG AAAAGCTCGA ATTCTCTGAA
GGCTTTACCG ACCTGCACAC CGTGAGCTAC CAGGAAATTC TTGCTGGCCG CGGCTACGGA
TTGGCCGATG CACGCCACTG CATTGAAACC GTCAATGTCA TTCGCAGCGC TGTTCCCGTC
AAAGGCGAAC AGGGAGAAGT GCACCCCTTT GTGCAGCGCC TGGCTTGA
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| Protein sequence | MKNFALIGAA GYIAPRHMRA IKDTGNHLAV AYDINDSVGI IDSISPQSEF FTEFERFQEH
AQQLKRNPAS ALDYVAVCSP NYLHHAHIAA GLRLGADVIC EKPLVPTPEL VDELALVEKE
TGRRVHNILQ LRHHEAILRL RDKVAKAPSD TKFDVELTYI TSRGKWYAES WKGDNRKSFG
VATNIGVHFY DMLHFIFGKL QRNVVHYSGV AKAAGYLEYE RARVRWFLSI DADDLPADVK
GKKTTFRNID VSGEKLEFSE GFTDLHTVSY QEILAGRGYG LADARHCIET VNVIRSAVPV
KGEQGEVHPF VQRLA
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