| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1908 |
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| Symbol | |
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| ID | 7971087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2040372 |
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| End bp | 2041736 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792508 |
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| Product | putative xenobiotic (desulfurization)monooxygenase subunit A, NtaA/SnaA/SoxA/DszA family |
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| Protein accession | YP_002943822 |
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| Protein GI | 239814912 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.504324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCAT CGACGCGCCA GTTCAAGCTC GGCGCCTTCC TCATGCAGAC CGGCCACCAT
ATCGCGGCCT GGCGCCATCC GGGCGCGCAG GCCGATGCCG GGAGCAACTT CCGCCACTAC
GTCGAACTTG CGCAGAAGGC GGAAGCGGCC AAGTTCGACG CCATCTTCCT GGCCGATTCG
GTCGGCGTTC GCAACAGCGA CCTGCCCTCG CTCTCGCGCA CGGCGCGCGC CGACCACTTC
GAGCCGCTCA CGCTGCTTGC GGCCATTGCG GCGCTGACCG AGCGCATCGG GCTCATCGCC
ACGGTGTCGA CCAGCTTCAA CGAGCCCTTC AACGTGGCGC GCAAGTTTGC CTCGCTCGAC
CAGATCAGCG GCGGACGCTC GGGCTGGAAC CTGGTGACCT CCAGCGGCAC CGGCGAGGCA
CAGAACTTCA ACCGCGACGA GCATTTCGCG CACGCGCTGC GCTACGAGCG CGCGGCCGAG
TTCCACGACG TGGTCACGGG CCTGTGGGAC AGCTGGGAGG ACGACAGCTT CGTGCGCGAC
AAGGCGAGCG GCCAGTACTT CGACGAGCAC AAGCTGCACG TGCTGGGCCA CAAGGGCACG
CACTTCTCGG TGCGCGGCCC GCTCAATGTC GCGCGCTCGC CGCAGGGGCG GCCGGTGGTG
GTGCAGGCCG GTGCCTCCGA AGCAGGCCGC GACCTGGCCG CGCGCACGGC CGAAGTGATC
TTCGTCGCAC ACCAGACCTT CGACGAGGCG AAGGCCTTCT ACGCCGACAT CAAGGGCCGG
CTGCCGGGCC ATGGCCGCCA CCCCGACGAC GTGAAGATCA TGCCCGGCAT CTTCCCCGTG
GTCGGCCGCA CGCAGGCAGA GGCCGAGGAG AAGTTCGAGC AGCTGCAGCA ACTGGTGCAC
CCGGTGGTCG GCGTGTCGCT GCTGTCGAAC GTAATCGGAG GCTTCGATTT CTCCAGGCTG
CCGGTCGACG GCCCGCTGCC CGAACTGCCG GAAACCAACG GCCCCAAGAG CCGCCAGCGG
CTGCTGCTGG ACCTGGCGCG GCGCGAAAAC CTCAGCATCC GCGATCTCTA CCTGCGCATT
GCCGGCGCGC GCGGCCACCA GCAGGTGGTG GGCACGCCCG CCCACATTGC CGACCAGCTG
CAGCAGTGGT TCGAGGAAAG CGGCGCGGAC GGCTTCAACA TCATGGCGCC GTGGTTCCCG
GGCGGCCTGG ACGACTTCAT CGAACTGGTG CTGCCCGAGC TGCGGCGGCG CGGCCTGTTC
CGCACCGAGT ACGAAGGCCG CACGCTGCGC GAGCACCTCG GGCTGCGGCG GCCCGCGCAT
CCGGCGCATT CGGCGCGCGA AGCGCATCCG GCCGCCATCG CGTGA
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| Protein sequence | MASSTRQFKL GAFLMQTGHH IAAWRHPGAQ ADAGSNFRHY VELAQKAEAA KFDAIFLADS
VGVRNSDLPS LSRTARADHF EPLTLLAAIA ALTERIGLIA TVSTSFNEPF NVARKFASLD
QISGGRSGWN LVTSSGTGEA QNFNRDEHFA HALRYERAAE FHDVVTGLWD SWEDDSFVRD
KASGQYFDEH KLHVLGHKGT HFSVRGPLNV ARSPQGRPVV VQAGASEAGR DLAARTAEVI
FVAHQTFDEA KAFYADIKGR LPGHGRHPDD VKIMPGIFPV VGRTQAEAEE KFEQLQQLVH
PVVGVSLLSN VIGGFDFSRL PVDGPLPELP ETNGPKSRQR LLLDLARREN LSIRDLYLRI
AGARGHQQVV GTPAHIADQL QQWFEESGAD GFNIMAPWFP GGLDDFIELV LPELRRRGLF
RTEYEGRTLR EHLGLRRPAH PAHSAREAHP AAIA
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