| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1906 |
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| Symbol | |
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| ID | 7971085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2037742 |
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| End bp | 2039115 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792506 |
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| Product | DszA family monooxygenase |
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| Protein accession | YP_002943820 |
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| Protein GI | 239814910 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.214665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCAGA AGAAGAAAGA GATCCTGCTC AACGCGTTCA ACATGAACTG CGTCGGCCAC
ATCAACCACG GCCTGTGGAC CCATCCGCGC GACCGCTCGC TCGAATACAA CACGCTCGAA
TACTGGACCA GCATCGCGCG CACCTTGGAG CGCGGCCTGT TCGACGGCCT GTTCATTGCC
GACATCGTGG GCGTCTACGA CGTCTACCAG CACAACGTAG ACGTGACGCT GCGCGAGTCG
ATCCAGCTGC CGGTGAACGA CCCGCTGATG CTGGTGCCGG CCATGGCGGC GGCGACCCGG
CACCTGGGCT TCGGCGTCAC GGTCAATCTG ACCTACGAGC AGCCCTACCT GCTGGCGCGG
CGCTTCTCGA CGCTGGACCA TCTCACGCGC GGACGCATCG GCTGGAACAT CGTCACCGGC
TATCTCGACA GCGCCGCGCG CGCGATGGGC CTGGCCGAGC AGATCGCGCA CGACGAGCGC
TACGAGCGGG CCGACGAGTA CCTGGAGGTG CTCTACAAGC TGTGGGAAGG GAGCTGGGAA
GACGCAGCCG TGCGGCGCGA CAAGGCCGCG CGCGTCTTCG CGGACCCGGC CAGGGTGCAC
AAGGTGCGGC ACGAGGGCCG CTACCACCAG GTCGAGGGCT ACCACCTGGC CGAGCCCTCG
CCGCAGCGCA CGCCGGTGTT GTTCCAGGCC GGCAGCTCCG GCCGCGGCCA GCGCTTTGCC
GCACGGCACG CGGAGTGCGT CTTCATCTCG CCGCCCAGCA AGGAAGCAGC GCGCCAGACC
GTGCAGGCAC TGCGCGAACA GCTGGTGCAG GCCGGCCGGC GTCCCGACGA CGTCAAGGTG
TTCGTCGGCG CCGCGGTGGT GCCCGGCGCG AGCACGAAAG AGGCGCAGGA AAAGTACGCG
GACTATCGGC GCTACGCGAG CCGCGAGGCC GGCCTGGCCC ACTTCTCGGC CAGCACGGGC
ATCGACTACG CGCGCTACGG CCTGGACGAG CCGATCGACT ACGGCAAGAC CAACGCCATC
GAATCGGCCA CCCGCACCGC CGAGCAGCAG GGCTGGACGC ACCGCAAGCT GCTGGACCTG
TTCGAGCTCG GCGGGCGCTA CCCGGCCATC GTCGGCGATG CCTCGCAGGT GGCGGACGAA
CTGCAGTCGT GGATCGACGA GACCGGCGCG GACGGCTTCA ACCTGAGCCG CACCGTGGTG
CCCGAGAGCT ACGAGGATTT CGTCGACCTG GTCGTGCCCG AGCTGCAGAA CCGCGGCATC
TACAAGACCG CCTATGCCGA AGGCAGCCTG CGCCGCAAGC TGTTCGACGC CGGCGACCGG
CTGCCTGCGC GCCATGCGGC AGCGCAGTTC CGCCATCGCG CCGGCGAGGC CTGA
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| Protein sequence | MAQKKKEILL NAFNMNCVGH INHGLWTHPR DRSLEYNTLE YWTSIARTLE RGLFDGLFIA
DIVGVYDVYQ HNVDVTLRES IQLPVNDPLM LVPAMAAATR HLGFGVTVNL TYEQPYLLAR
RFSTLDHLTR GRIGWNIVTG YLDSAARAMG LAEQIAHDER YERADEYLEV LYKLWEGSWE
DAAVRRDKAA RVFADPARVH KVRHEGRYHQ VEGYHLAEPS PQRTPVLFQA GSSGRGQRFA
ARHAECVFIS PPSKEAARQT VQALREQLVQ AGRRPDDVKV FVGAAVVPGA STKEAQEKYA
DYRRYASREA GLAHFSASTG IDYARYGLDE PIDYGKTNAI ESATRTAEQQ GWTHRKLLDL
FELGGRYPAI VGDASQVADE LQSWIDETGA DGFNLSRTVV PESYEDFVDL VVPELQNRGI
YKTAYAEGSL RRKLFDAGDR LPARHAAAQF RHRAGEA
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