| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1900 |
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| Symbol | |
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| ID | 7971079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2031629 |
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| End bp | 2032438 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792501 |
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| Product | ABC transporter related |
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| Protein accession | YP_002943815 |
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| Protein GI | 239814905 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTCA AGATCTCGGC CCGCGACCTG CGGATGGACT ATGCGGCGCG CGGTGCGAGC
GAGCGCGTGC GCGTGCTCGA AGGCTTCGAC CTGGACGTGC GCGACGGCGA ATTCCTCTCG
GTGCTCGGCC CCTCGGGCTG CGGCAAGTCG ACCTTCCTCG GCATCCTGGC CGGGCTGACG
GAGCGCACCG GCGGGCGCAT TGCCATCAAC GGCCAACCGC TCGCGGGCAT CAACCGCAAC
CAGGGCGTGG TGTTCCAGGG CTATGCGCTG TTTCCGTGGC TCTCGGTGCT CGACAACATC
GCCGTGGGGC TGGAGATTCG CGGCATTGGC AAGGCCGAGC GCCGCCGCAC CGCGCACGAA
TACCTCGAAC TGGTGGGCCT GCATGGCTTT GCAGACCGCT ATCCGCACGA GATCTCGGGC
GGCATGAAGC AGCGCGTGGC CATTGCGCGC TCGCTCGCCT ACAGGCCCGA CGTGCTGCTG
ATGGACGAGC CCTTTGCGGC GCTCGATGCG CAGACGCGCG AGGTGCTGCA GGGCGAGCTG
CTGCGCATCT GGGAGCAGTA CCGCAAGACC ATCGTCTTCA TCACGCACAG CCTGGAGGAA
GCGGTGTACC TCTCCGACCG AGTGGCGGTG ATGACGCAGC GGCCCGGGCG CGTCAAGGAC
ATCATCGACA TTCCGCTCGC GCGCCCGCGC TTGGCGCAGG TGCGCCATAC GGCCGAGTTC
GCGGCGCTGC GCCAGCGCGC GTGGGAGGTG CTGAAGGATG AAGTGCAGCT CGGGCTGAAG
CCGCGGTCGC TCGAGGGAGT GGTGTCATGA
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| Protein sequence | MTFKISARDL RMDYAARGAS ERVRVLEGFD LDVRDGEFLS VLGPSGCGKS TFLGILAGLT
ERTGGRIAIN GQPLAGINRN QGVVFQGYAL FPWLSVLDNI AVGLEIRGIG KAERRRTAHE
YLELVGLHGF ADRYPHEISG GMKQRVAIAR SLAYRPDVLL MDEPFAALDA QTREVLQGEL
LRIWEQYRKT IVFITHSLEE AVYLSDRVAV MTQRPGRVKD IIDIPLARPR LAQVRHTAEF
AALRQRAWEV LKDEVQLGLK PRSLEGVVS
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