Gene Vapar_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1896 
Symbol 
ID7971075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2028589 
End bp2028918 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content71% 
IMG OID644792497 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002943811 
Protein GI239814901 
COG category[C] Energy production and conversion 
COG ID[COG1146] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAG TCATCAGCGC CGAGCGCTGC ACCGGCTGCA ACATCTGCGT GAACGCCTGC 
CCGACCAACG TGTTCGAGGC GGTGCCGGGC GGCCCGCCGC GCATCGCCCG GCAGGACGAC
TGCCAGACCT GCTTCATGTG CGAGCTGTAC TGCCCCGAGG ACGCGCTGTA CGTCGCGCCC
ATTGCCGATC GCAGTGCCAC CGCCGAGGAG CGCGATGCCG CGGCCTCGGC CCTGATGGGC
AGCTACCGCA GTGCCATCGG CTGGGGCCGA GGCCGGCAGT CGACCGCTTC GGCCGATGCG
AGCTTCGAGC TCCTGCGGCG GGCGCACTGA
 
Protein sequence
MIEVISAERC TGCNICVNAC PTNVFEAVPG GPPRIARQDD CQTCFMCELY CPEDALYVAP 
IADRSATAEE RDAAASALMG SYRSAIGWGR GRQSTASADA SFELLRRAH