| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1893 |
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| Symbol | |
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| ID | 7971072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2023951 |
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| End bp | 2024883 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792494 |
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| Product | major membrane protein I |
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| Protein accession | YP_002943808 |
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| Protein GI | 239814898 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.558879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAA CAGTCGGTGG TATCACCGCC CTTGGCGACA ACGCCGCCCG CCAGCTGGCC
AACGCCACCA AGACAGTCCC GCAGCTGGAG ACCATCAGCC CGCGCTGGCT GACACACCTC
TTGCAATGGG TGCCGGTGGA GGCGGGCATC TACCGCGTCA ACAAGGTCAG GAATCCCGAA
TCGATCAAGG TCACCTGCAC CTCGCGCGAA GAAGAGAACC AACTGCCGCG CACCTTCGTC
GACTACGAAG AGAACCCGCG CGAGCACTAC CTCAACGCCG TGAGCACCGT GCTGGACGTG
CACACGCGCA TCTCCGACCT CTACAGCAGC CCGCACGACC AGATCAAGGA ACAACTGCGC
CTCACGATCG AAACGATCAA GGAGAACCAG GAGAGCGAAC TCATCAACAA CCCCGACTAC
GGCCTCCTGG CCCAGGTGAG CGAAGAGCAG CGCATCTTCC CGCTGACCGG CGCGCCCACG
CCCGACGACC TCGACGAGCT GCTGACCAAG GTGTGGAAGG AGCCCGCCTT CTTCCTCACG
CATCCGCTGG CCATTGCCGC CTTCGGCCGC GAGGCCACGC GCCGCGGCAC GCCGCCGCCG
ACGGTGAGCC TGTTCGGCTC GCAGTTCATC ACCTGGCGCG GCATTCCGCT GATCCCGTCG
AACAAGGTGC CCGTGGCCGA CGGCAAGAGC AAGATCCTGC TGCTGCGCGT GGGCGACAAG
CGCCAGGGCG TGGTGGGGCT GTTCCAGCCG GGGCTCTCGG GCGAGCAGAG CCCGGGCCTG
TCGGTGCGGT TCATGGGCAT CAACAACCAT GCGATCGCGT CGTACCTGAT CTCGCTGTAC
TGCTCGCTGG CGGTGCTGAC CACCGATGCG CTGGCCGTGC TCGACGACGT CGAGATCGGC
AAGTACCACG ACTATCCCGA CACCTACAAG TAA
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| Protein sequence | MSATVGGITA LGDNAARQLA NATKTVPQLE TISPRWLTHL LQWVPVEAGI YRVNKVRNPE
SIKVTCTSRE EENQLPRTFV DYEENPREHY LNAVSTVLDV HTRISDLYSS PHDQIKEQLR
LTIETIKENQ ESELINNPDY GLLAQVSEEQ RIFPLTGAPT PDDLDELLTK VWKEPAFFLT
HPLAIAAFGR EATRRGTPPP TVSLFGSQFI TWRGIPLIPS NKVPVADGKS KILLLRVGDK
RQGVVGLFQP GLSGEQSPGL SVRFMGINNH AIASYLISLY CSLAVLTTDA LAVLDDVEIG
KYHDYPDTYK
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