Gene Vapar_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1890 
Symbol 
ID7971069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp2022185 
End bp2022670 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content72% 
IMG OID644792491 
ProductRhodanese domain protein 
Protein accessionYP_002943805 
Protein GI239814895 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTGG AAGTTGAAGA AGATCTCGCC CTCTTGCCGC CCGCCCTGGA GGAAGCGCGC 
ATTCGTGCGG CCGATGCGGG ATGGCCCTAT GCCGGCGGCG TGACGCCGCC CGTCGCATGG 
GCGCTGGTGC AGGGCGGCCG GGCCGTGCTG GTGGATGTGC GCTCGGGCGA AGAGCGCAAG 
TTCGTGGGCC ATGTGCCCGA GAGCCTGCAC GTGGCCTGGG CGACCGGCAC GGCGCTCACG 
CGCAATCCGC GCTTCGTGCG CGAGCTGGAG GCCAGGCTGG CGAAGCACGG CGGCAAGGAC 
GCGGTGGCGC TGCTGCTGTG CCGCAGCGGC AAGCGCTCGG CACTCGCGGC GGAAGCGGCC 
GCCAAGGCCG GCTTCACGCA CGTGTTCAAC GTGCTCGAAG GCTTCGAGGG CGAGATCGAC 
GCACGCCAGC ACCGCGGCGC CTCCGACGGC TGGCGCTTCC ACGGCCTGCC GTGGGTGCAG 
GACTGA
 
Protein sequence
MSVEVEEDLA LLPPALEEAR IRAADAGWPY AGGVTPPVAW ALVQGGRAVL VDVRSGEERK 
FVGHVPESLH VAWATGTALT RNPRFVRELE ARLAKHGGKD AVALLLCRSG KRSALAAEAA 
AKAGFTHVFN VLEGFEGEID ARQHRGASDG WRFHGLPWVQ D